RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 TMEM270Q6UE05 265 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 ATP6V1G3Q96LB4 118 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 NT5C1BQ96P26 610 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 MXRA8Q9BRK3 442 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 ALG13Q9NP73 1137 aaKnown RBP11.98□□□□□ -0.49
DDR1-239ENST00000452441 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.98□□□□□ -0.49
DDR1-239ENST00000452441 CCDC88AQ3V6T2 1871 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 AHDC1Q5TGY3 1603 aaPredicted RBP11.98□□□□□ -0.49
DDR1-239ENST00000452441 CETN2P41208 172 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 PIK3CAP42336 1068 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 TMEM119Q4V9L6 283 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 ZNF572Q7Z3I7 529 aaPredicted RBP11.98□□□□□ -0.49
DDR1-239ENST00000452441 FRMD5Q7Z6J6 570 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 GMCL1Q96IK5 515 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 GDF3Q9NR23 364 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 HSPBP1Q9NZL4 362 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 RNF14Q9UBS8 474 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 CEP83Q9Y592 693 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 NR3C2P08235 984 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 BFSP1Q12934 665 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 HIBCHQ6NVY1 386 aaPredicted RBP11.97□□□□□ -0.49
DDR1-239ENST00000452441 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 NLRP14Q86W24 1093 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 ARHGEF19Q8IW93 802 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 KIRREL3Q8IZU9 778 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 IQCKQ8N0W5 287 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 SLC7A3Q8WY07 619 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 RUBCNQ92622 972 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 ATP6V0A1Q93050 837 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 C1orf112Q9NSG2 853 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 RNF19AQ9NV58 838 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 APEX2Q9UBZ4 518 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 WDR64B1ANS9 1081 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 NSFP46459 744 aaKnown RBP11.97□□□□□ -0.49
DDR1-239ENST00000452441 GKAP1Q5VSY0 366 aaPredicted RBP11.97□□□□□ -0.49
DDR1-239ENST00000452441 ZNF564Q8TBZ8 553 aaPredicted RBP11.97□□□□□ -0.49
DDR1-239ENST00000452441 KIFAP3Q92845 792 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 PBKQ96KB5 322 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 RGL2O15211 777 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 PPP1R37O75864 691 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 CCND2P30279 289 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 PPP2R5DQ14738 602 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 MEI1Q5TIA1 1274 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 SCYL2Q6P3W7 929 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 HOOK3Q86VS8 718 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 SRRM1Q8IYB3 904 aaKnown RBP11.97□□□□□ -0.49
DDR1-239ENST00000452441 ANKS4BQ8N8V4 417 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 NAP1L3Q99457 506 aaPredicted RBP11.97□□□□□ -0.49
DDR1-239ENST00000452441 AGPAT1Q99943 283 aa11.97□□□□□ -0.49
DDR1-239ENST00000452441 FAM49AQ9H0Q0 323 aaPredicted RBP11.97□□□□□ -0.49
DDR1-239ENST00000452441 SYNJ2BP-COX16A0A087WUM0 186 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 CAND2O75155 1236 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 SPAG7O75391 227 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 PGK2P07205 417 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 HNRNPH1P31943 449 aaKnown RBP11.96□□□□□ -0.49
DDR1-239ENST00000452441 GBP2P32456 591 aaPredicted RBP11.96□□□□□ -0.49
DDR1-239ENST00000452441 SKOR1P84550 965 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 PPATQ06203 517 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 COBLL1Q53SF7 1204 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 NUGGCQ68CJ6 796 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 OTOP1Q7RTM1 612 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 CCDC33Q8N5R6 958 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 PAF1Q8N7H5 531 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 PLVAPQ9BX97 442 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 EDEM3Q9BZQ6 932 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 COX16Q9P0S2 106 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 DDX60LQ5H9U9 1706 aaKnown RBP11.96□□□□□ -0.49
DDR1-239ENST00000452441 K7ERI5 159 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 SNHG28P0DPA3 235 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 VCAM1P19320 739 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 STX2P32856 288 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 EPS8L3Q8TE67 593 aaKnown RBP11.96□□□□□ -0.49
DDR1-239ENST00000452441 WHAMMQ8TF30 809 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 TATDN2Q93075 761 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 INPP4AQ96PE3 977 aaPredicted RBP11.96□□□□□ -0.49
DDR1-239ENST00000452441 NEUROG2Q9H2A3 272 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 C10orf88Q9H8K7 445 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 ROBO3Q96MS0 1386 aa11.96□□□□□ -0.49
DDR1-239ENST00000452441 PSMC4P43686 418 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 TMED2Q15363 201 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 PHLDB3Q6NSJ2 640 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 NEK9Q8TD19 979 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 ZNF473Q8WTR7 871 aaKnown RBP11.96□□□□□ -0.5
DDR1-239ENST00000452441 RFFLQ8WZ73 363 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 PRMT1Q99873 361 aaKnown RBP11.96□□□□□ -0.5
DDR1-239ENST00000452441 EPN3Q9H201 632 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 SEMA4AQ9H3S1 761 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 ZWILCHQ9H900 591 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 PCSK1NQ9UHG2 260 aa11.96□□□□□ -0.5
DDR1-239ENST00000452441 GOLGA8RI6L899 631 aa11.95□□□□□ -0.5
DDR1-239ENST00000452441 RASGRF2O14827 1237 aa11.95□□□□□ -0.5
DDR1-239ENST00000452441 MEFVO15553 781 aaPredicted RBP11.95□□□□□ -0.5
DDR1-239ENST00000452441 GPC5P78333 572 aa11.95□□□□□ -0.5
DDR1-239ENST00000452441 TMEM62Q0P6H9 643 aa11.95□□□□□ -0.5
DDR1-239ENST00000452441 KYNUQ16719 465 aa11.95□□□□□ -0.5
DDR1-239ENST00000452441 CDO1Q16878 200 aa11.95□□□□□ -0.5
DDR1-239ENST00000452441 TKFCQ3LXA3 575 aa11.95□□□□□ -0.5
DDR1-239ENST00000452441 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
DDR1-239ENST00000452441 KDM7AQ6ZMT4 941 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms