RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 ABL1P00519 1130 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 ARL2P36404 184 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 KCNJ6P48051 423 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 FXR2P51116 673 aaKnown RBP eCLIP8.7□□□□□ -1.02
CNOT4-207ENST00000451834 STAT5BP51692 787 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 DSC1Q08554 894 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 SNX1Q13596 522 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 AMHR2Q16671 573 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 XKR3Q5GH77 459 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 SLC24A5Q71RS6 500 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 CCDC60Q8IWA6 550 aaPredicted RBP8.7□□□□□ -1.02
CNOT4-207ENST00000451834 CEP57L1Q8IYX8 460 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 SMRP1Q8NCR6 262 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 BRF1Q92994 677 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 HSD17B14Q9BPX1 270 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 MLXIPQ9HAP2 919 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 ZNF302Q9NR11 478 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 L1RE1Q9UN81 338 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 FAM50BQ9Y247 325 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 CYP46A1Q9Y6A2 500 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 CDY2AQ9Y6F7 541 aa8.7□□□□□ -1.02
CNOT4-207ENST00000451834 A0A0U1RQF3 1178 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 CCDC151A5D8V7 595 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 KINO60870 393 aaKnown RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 CA3P07451 260 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 DARSP14868 501 aaKnown RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 HOXA9P31269 272 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 ELF1P32519 619 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 PPM1AP35813 382 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 ME1P48163 572 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 SARNPP82979 210 aaKnown RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 ZP2Q05996 745 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 BLOC1S2Q6QNY1 142 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 Q6ZUG5 572 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 FAM228AQ86W67 206 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 FSIP1Q8NA03 581 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 RABGGTAQ92696 567 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 SCLYQ96I15 445 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 POP1Q99575 1024 aaKnown RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 DUSP9Q99956 384 aaKnown RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 CPVLQ9H3G5 476 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 FANCLQ9NW38 375 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 ZNF202O95125 648 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 CREMQ03060 361 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 E2F5Q15329 346 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 USP17L6PQ6QN14 398 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 SYNE3Q6ZMZ3 975 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 DDX53Q86TM3 631 aaKnown RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 IGSF22Q8N9C0 903 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 COLGALT1Q8NBJ5 622 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 SPPL3Q8TCT6 385 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 HLA-CQ95604 372 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 FOXP1Q9H334 677 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 UBE2ZQ9H832 354 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 SLC28A3Q9HAS3 691 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 HSFX1Q9UBD0 423 aa8.69□□□□□ -1.02
CNOT4-207ENST00000451834 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-207ENST00000451834 H3BQV1 296 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 IPO5O00410 1097 aaKnown RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 AP1G2O75843 785 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 INSRRP14616 1297 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 HOXD11P31277 338 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 FANCCQ00597 558 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.68□□□□□ -1.023e-10■■■■■ 29.8
CNOT4-207ENST00000451834 ZNF513Q8N8E2 541 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 HAS1Q92839 578 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 THOC1Q96FV9 657 aaKnown RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 OXCT2Q9BYC2 517 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 ANO10Q9NW15 660 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 KCND2Q9NZV8 630 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 KLF18A0A0U1RQI7 1052 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 ZNF862O60290 1169 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 SERPINC1P01008 464 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 FDPSP14324 419 aaKnown RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 HOXB8P17481 243 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 ABCD1P33897 745 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 PLA2G5P39877 138 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 MRPS25P82663 173 aaKnown RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 BLIDQ8IZY5 108 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 SLC39A11Q8N1S5 342 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 NOA1Q8NC60 698 aaKnown RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 CCDC150Q8NCX0 1101 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 IER2Q9BTL4 223 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 ZBP1Q9H171 429 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 MRPL44Q9H9J2 332 aaKnown RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 AGPAT5Q9NUQ2 364 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 SPTBN5Q9NRC6 3674 aaKnown RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 MUC22E2RYF6 1773 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 DLL1O00548 723 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 HYAL1Q12794 435 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 OTUD6BQ8N6M0 293 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 BCAS4Q8TDM0 211 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 USP28Q96RU2 1077 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 IFIH1Q9BYX4 1025 aaKnown RBP8.68□□□□□ -1.02
CNOT4-207ENST00000451834 PLAGL2Q9UPG8 496 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 TELO2Q9Y4R8 837 aa8.68□□□□□ -1.02
CNOT4-207ENST00000451834 LCHNA4D1U4 455 aa8.67□□□□□ -1.02
CNOT4-207ENST00000451834 EIF4E1BA6NMX2 242 aaKnown RBP8.67□□□□□ -1.02
CNOT4-207ENST00000451834 RPS6KA5O75582 802 aa8.67□□□□□ -1.02
CNOT4-207ENST00000451834 SYF2O95926 243 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms