RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 MPZL3Q6UWV2 235 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 CXCL17Q6UXB2 119 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 CRELD2Q6UXH1 353 aaPredicted RBP12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 SRGAP1Q7Z6B7 1085 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 USP37Q86T82 979 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 C7orf31Q8N865 590 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 ZNF397Q8NF99 534 aaPredicted RBP12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 NLRP7Q8WX94 980 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 BAP1Q92560 729 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 SIX2Q9NPC8 291 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 KCND1Q9NSA2 647 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 AGPAT5Q9NUQ2 364 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 SPTLC3Q9NUV7 552 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 GCNT4Q9P109 453 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 CEP72Q9P209 647 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 ANKFY1Q9P2R3 1169 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 FBXL5Q9UKA1 691 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 TNFSF13BQ9Y275 285 aa12.22□□□□□ -0.45
NDUFA3-209ENST00000451517 LRRIQ3A6PVS8 624 aaPredicted RBP12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 OGTO15294 1046 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 B4GALT5O43286 388 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 SLC9A1P19634 815 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 GRK4P32298 578 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 CLDN10P78369 228 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 ZNF200P98182 395 aaPredicted RBP12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 NOLC1Q14978 699 aaKnown RBP eCLIP12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 KCNA10Q16322 511 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 NBPF20Q3BBV1 942 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 KLHDC7AQ5VTJ3 777 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 PDXDC1Q6P996 788 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 SESTD1Q86VW0 696 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 TMTC1Q8IUR5 882 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 NME8Q8N427 588 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 PPP1R16BQ96T49 567 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 INTS2Q9H0H0 1204 aaKnown RBP12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 FAM49AQ9H0Q0 323 aaPredicted RBP12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 RRAGDQ9NQL2 400 aaPredicted RBP12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 GTF2IRD1Q9UHL9 959 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 DAAM1Q9Y4D1 1078 aa12.21□□□□□ -0.45
NDUFA3-209ENST00000451517 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 TSPAN1O60635 241 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 ASGR1P07306 291 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 ACTN1P12814 892 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 HSPA6P17066 643 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 MATR3P43243 847 aaKnown RBP eCLIP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 GCLMP48507 274 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 ACOT2P49753 483 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 MXI1P50539 228 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 POLR2FP61218 127 aaKnown RBP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 CDK17Q00537 523 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 APBA1Q02410 837 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 CETN1Q12798 172 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 KIZQ2M2Z5 673 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 EPC2Q52LR7 807 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 ZBTB41Q5SVQ8 909 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 EEF1DP3Q658K8 133 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 E4F1Q66K89 784 aaPredicted RBP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 TAF2Q6P1X5 1199 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 TRIM65Q6PJ69 517 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 WDR59Q6PJI9 974 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 CYP26C1Q6V0L0 522 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 ZBTB33Q86T24 672 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 RNF180Q86T96 592 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 BRSK2Q8IWQ3 736 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 C17orf53Q8N3J3 647 aaPredicted RBP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 EHBP1Q8NDI1 1231 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 LMO3Q8TAP4 145 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 DNAJB3Q8WWF6 145 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 SYN2Q92777 582 aaPredicted RBP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 CCDC127Q96BQ5 260 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 SCLT1Q96NL6 688 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 GCOM2Q9BZD3 368 aaPredicted RBP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 TMEM117Q9H0C3 514 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 NUCKS1Q9H1E3 243 aaKnown RBP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 CDT1Q9H211 546 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 PDZD7Q9H5P4 517 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 RBAKQ9NYW8 714 aaPredicted RBP12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 MYO6Q9UM54 1294 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 PLAGL2Q9UPG8 496 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 COQ4Q9Y3A0 265 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 TRIM17Q9Y577 477 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
NDUFA3-209ENST00000451517 SOWAHDA6NJG2 315 aa12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 LRRC53A6NM62 1247 aa12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 CSDE1O75534 798 aaKnown RBP12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 CABYRO75952 493 aa12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 MCF2P10911 925 aa12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 HARSP12081 509 aaKnown RBP12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 DARSP14868 501 aaKnown RBP12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 UCHL3P15374 230 aa12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 WNT7BP56706 349 aa12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 PCBP1Q15365 356 aaKnown RBP eCLIP12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 ZNF568Q3ZCX4 644 aa12.19□□□□□ -0.46
NDUFA3-209ENST00000451517 LHX8Q68G74 356 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms