RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 BRD1O95696 1058 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 EFEMP2O95967 443 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 PDGFBP01127 241 aaPredicted RBP30.04■■■□□ 2.4
USP42-204ENST00000451154 OR52Z1P0C646 297 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 VCPP55072 806 aaKnown RBP30.04■■■□□ 2.4
USP42-204ENST00000451154 KIAA0319Q5VV43 1072 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 ZDHHC14Q8IZN3 488 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 RABGGTAQ92696 567 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 COLEC11Q9BWP8 271 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 SMOC2Q9H3U7 446 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 SORCS3Q9UPU3 1222 aa30.04■■■□□ 2.4
USP42-204ENST00000451154 TEX28O15482 410 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 MYBP10242 640 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 RPA1P27694 616 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 MRE11P49959 708 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 MTMR3Q13615 1198 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 RNF168Q8IYW5 571 aaPredicted RBP30.03■■■□□ 2.4
USP42-204ENST00000451154 FBXO18Q8NFZ0 1043 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 ERMNQ8TAM6 284 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 FZD8Q9H461 694 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 USTQ9Y2C2 406 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 SSX2IPQ9Y2D8 614 aa30.03■■■□□ 2.4
USP42-204ENST00000451154 TTLL13PA6NNM8 815 aa30.02■■■□□ 2.4
USP42-204ENST00000451154 GLUD2P49448 558 aa30.02■■■□□ 2.4
USP42-204ENST00000451154 TTC38Q5R3I4 469 aa30.02■■■□□ 2.4
USP42-204ENST00000451154 PADI6Q6TGC4 694 aa30.02■■■□□ 2.4
USP42-204ENST00000451154 UBALD2Q8IYN6 164 aa30.02■■■□□ 2.4
USP42-204ENST00000451154 PLCD3Q8N3E9 789 aa30.02■■■□□ 2.4
USP42-204ENST00000451154 BSNDQ8WZ55 320 aa30.02■■■□□ 2.4
USP42-204ENST00000451154 PRMT7Q9NVM4 692 aaPredicted RBP30.02■■■□□ 2.4
USP42-204ENST00000451154 AVPR2P30518 371 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 RBM25P49756 843 aaKnown RBP30.01■■■□□ 2.39
USP42-204ENST00000451154 CDCA2Q69YH5 1023 aaPredicted RBP30.01■■■□□ 2.39
USP42-204ENST00000451154 PPP4R3CPQ6ZMV5 832 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 ZBTB8OSQ8IWT0 167 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 B3GALT6Q96L58 329 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 ZSCAN31Q96LW9 406 aaPredicted RBP30.01■■■□□ 2.39
USP42-204ENST00000451154 GPR62Q9BZJ7 368 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 RXFP1Q9HBX9 757 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 POLD4Q9HCU8 107 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 MAN1C1Q9NR34 630 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 USP20Q9Y2K6 914 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 C2orf16Q68DN1 1984 aa30.01■■■□□ 2.39
USP42-204ENST00000451154 ARHGEF35A5YM69 484 aa30■■■□□ 2.39
USP42-204ENST00000451154 ADH1AP07327 375 aa30■■■□□ 2.39
USP42-204ENST00000451154 CYP11B2P19099 503 aa30■■■□□ 2.39
USP42-204ENST00000451154 DSG1Q02413 1049 aa30■■■□□ 2.39
USP42-204ENST00000451154 GNL2Q13823 731 aaKnown RBP30■■■□□ 2.39
USP42-204ENST00000451154 FAM184AQ8NB25 1140 aa30■■■□□ 2.39
USP42-204ENST00000451154 PRIMPOLQ96LW4 560 aa30■■■□□ 2.39
USP42-204ENST00000451154 PHOX2BQ99453 314 aa30■■■□□ 2.39
USP42-204ENST00000451154 CHST7Q9NS84 486 aa30■■■□□ 2.39
USP42-204ENST00000451154 CACNG4Q9UBN1 327 aa30■■■□□ 2.39
USP42-204ENST00000451154 PLXNA3P51805 1871 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 KMT2EQ8IZD2 1858 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 SPATA31D3P0C874 917 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 LIG1P18858 919 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 ORC2Q13416 577 aaPredicted RBP29.99■■■□□ 2.39
USP42-204ENST00000451154 NBR1Q14596 966 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 ECM1Q16610 540 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 FAM187BQ17R55 369 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 SPATA31D4Q6ZUB0 917 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 NOSTRINQ8IVI9 506 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 C4orf32Q8N8J7 132 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 KIF2CQ99661 725 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 PRRX2Q99811 253 aa29.99■■■□□ 2.39
USP42-204ENST00000451154 CCDC195A0A1B0GUA6 201 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 PTPN5P54829 565 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 HMGN5P82970 282 aaKnown RBP29.98■■■□□ 2.39
USP42-204ENST00000451154 TCF15Q12870 199 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 GRIK3Q13003 919 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 TMEM132AQ24JP5 1023 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 FUT10Q6P4F1 479 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 CCDC149Q6ZUS6 474 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 PALB2Q86YC2 1186 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 ACSF2Q96CM8 615 aaPredicted RBP29.98■■■□□ 2.39
USP42-204ENST00000451154 C2orf40Q9H1Z8 148 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 PDZD7Q9H5P4 517 aa29.98■■■□□ 2.39
USP42-204ENST00000451154 GLUD1P00367 558 aa29.97■■■□□ 2.39
USP42-204ENST00000451154 CCT6AP40227 531 aaKnown RBP29.97■■■□□ 2.39
USP42-204ENST00000451154 PRPF4BQ13523 1007 aaKnown RBP29.97■■■□□ 2.39
USP42-204ENST00000451154 C15orf39Q6ZRI6 1047 aa29.97■■■□□ 2.39
USP42-204ENST00000451154 OTOP3Q7RTS5 596 aa29.97■■■□□ 2.39
USP42-204ENST00000451154 PAAF1Q9BRP4 392 aa29.97■■■□□ 2.39
USP42-204ENST00000451154 SH2B1Q9NRF2 756 aaPredicted RBP29.97■■■□□ 2.39
USP42-204ENST00000451154 SNTG2Q9NY99 539 aa29.97■■■□□ 2.39
USP42-204ENST00000451154 ADAM28Q9UKQ2 775 aa29.97■■■□□ 2.39
USP42-204ENST00000451154 DENND4AQ7Z401 1863 aa29.97■■■□□ 2.39
USP42-204ENST00000451154 CACNA1HO95180 2353 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 N4BP3O15049 544 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 TADA2AO75478 443 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 PRKCBP05771 671 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 MAPK6Q16659 721 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 USP41Q3LFD5 358 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 GLYCTKQ8IVS8 523 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 CMASQ8NFW8 434 aaPredicted RBP29.96■■■□□ 2.39
USP42-204ENST00000451154 DEPTORQ8TB45 409 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 CXCL16Q9H2A7 254 aa29.96■■■□□ 2.39
USP42-204ENST00000451154 RFPL2O75678 378 aa29.95■■■□□ 2.39
USP42-204ENST00000451154 TRAPPC10P48553 1259 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms