RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 CDC42EP5Q6NZY7 148 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 SEPT1Q8WYJ6 367 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 MTFR1LQ9H019 292 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 CYP26B1Q9NR63 512 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 KLK14Q9P0G3 267 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 KIF17Q9P2E2 1029 aa13.52□□□□□ -0.25
AC006001.3-201ENST00000449307 ETFBP38117 255 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 HPS4Q9NQG7 708 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 ANLNQ9NQW6 1124 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 STXBP3O00186 592 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 ARHGAP25P42331 645 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 TFDP2Q14188 446 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 PDCD2Q16342 344 aaPredicted RBP13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 PCSK7Q16549 785 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 SLC35F6Q8N357 371 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 PABPC5Q96DU9 382 aaKnown RBP13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 ERLEC1Q96DZ1 483 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 NFKBIZQ9BYH8 718 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 SAMSN1Q9NSI8 373 aaKnown RBP13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 TTC7AQ9ULT0 858 aaPredicted RBP13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 SPATA31A1Q5TZJ5 1347 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 SHROOM2Q13796 1616 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 SUPT3HB4E1H0 165 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 SYNCRIPO60506 623 aaKnown RBP13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 KITP10721 976 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 ACOT2P49753 483 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 CCNYL1Q8N7R7 359 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 PLEKHF1Q96S99 279 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 NPC1L1Q9UHC9 1359 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 RBM41Q96IZ5 413 aaKnown RBP13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 CCDC195A0A1B0GUA6 201 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 ENAHQ8N8S7 591 aaPredicted RBP13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 GBP5Q96PP8 586 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 EFHD1Q9BUP0 239 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 CDV3Q9UKY7 258 aaKnown RBP13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 DR1Q01658 176 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 WDR72Q3MJ13 1102 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 SV2CQ496J9 727 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 DDIASQ8IXT1 998 aa13.51□□□□□ -0.25
AC006001.3-201ENST00000449307 RNASEH1O60930 286 aaKnown RBP13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 URODP06132 367 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 NUMBP49757 651 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 MAP1SQ66K74 1059 aaPredicted RBP13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 UNC13DQ70J99 1090 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 NUP85Q9BW27 656 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 PCDHGB4Q9UN71 923 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 ROR1Q01973 937 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 SFSWAPQ12872 951 aaKnown RBP13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 CDH18Q13634 790 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 ZNF746Q6NUN9 644 aaPredicted RBP13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 VMP1Q96GC9 406 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 PBKQ96KB5 322 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 SYTL2Q9HCH5 934 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 OGFRQ9NZT2 677 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 ACSL3O95573 720 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 CD4P01730 458 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 CLNS1AP54105 237 aaKnown RBP13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 COPS2P61201 443 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 RBP5P82980 135 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 PID1Q7Z2X4 250 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 TTC39CQ8N584 583 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 ASAP3Q8TDY4 903 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 OPTNQ96CV9 577 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 SEL1LQ9UBV2 794 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 NPHP3-ACAD11A0A0J9YXS1 232 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 SPDYAQ5MJ70 313 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 TRIM15Q9C019 465 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 ERAP1Q9NZ08 941 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 ITIH6Q6UXX5 1313 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 MAGEB2O15479 319 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 HIST1H2AGP0C0S8 130 aaPredicted RBP13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 HIST1H2ADP20671 130 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 HIST1H2AHQ96KK5 128 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 HIST1H2AJQ99878 128 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 H2AFJQ9BTM1 129 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
AC006001.3-201ENST00000449307 TLR2O60603 784 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 TRPA1O75762 1119 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 TDP2O95551 362 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 RALBP11234 206 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 CHRNA3P32297 505 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 MAPK9P45984 424 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 TTC17Q96AE7 1141 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 RAB23Q9ULC3 237 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 SYNGAP1Q96PV0 1343 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 APOL1O14791 398 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 TMC7Q7Z402 723 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 PPHLN1Q8NEY8 458 aaKnown RBP13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 UCMAQ8WVF2 138 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 AGAP3Q96P47 875 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 SPATA16Q9BXB7 569 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 IP6K2Q9UHH9 426 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 NAGPAQ9UK23 515 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 LRRC53A6NM62 1247 aa13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 MBL2P11226 248 aaPredicted RBP13.49□□□□□ -0.25
AC006001.3-201ENST00000449307 IRAK1BP1Q5VVH5 260 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms