RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 LGALS16A8MUM7 142 aa21.01■□□□□ 0.95
RPS28-202ENST00000449223 POU5F1Q01860 360 aaKnown RBP21.01■□□□□ 0.95
RPS28-202ENST00000449223 NCBP1Q09161 790 aaKnown RBP21.01■□□□□ 0.95
RPS28-202ENST00000449223 TRAF7Q6Q0C0 670 aa21.01■□□□□ 0.95
RPS28-202ENST00000449223 CATSPER4Q7RTX7 472 aa21.01■□□□□ 0.95
RPS28-202ENST00000449223 MFSD14AQ96MC6 490 aa21.01■□□□□ 0.95
RPS28-202ENST00000449223 MSTO1Q9BUK6 570 aa21.01■□□□□ 0.95
RPS28-202ENST00000449223 TMEM106CQ9BVX2 250 aa21.01■□□□□ 0.95
RPS28-202ENST00000449223 TAB2Q9NYJ8 693 aa21.01■□□□□ 0.95
RPS28-202ENST00000449223 ANKFY1Q9P2R3 1169 aa21.01■□□□□ 0.95
RPS28-202ENST00000449223 N4BP3O15049 544 aa21■□□□□ 0.95
RPS28-202ENST00000449223 OGTO15294 1046 aa21■□□□□ 0.95
RPS28-202ENST00000449223 TPM2P07951 284 aa21■□□□□ 0.95
RPS28-202ENST00000449223 MCF2P10911 925 aa21■□□□□ 0.95
RPS28-202ENST00000449223 CKBP12277 381 aa21■□□□□ 0.95
RPS28-202ENST00000449223 BFSP1Q12934 665 aa21■□□□□ 0.95
RPS28-202ENST00000449223 ZNF568Q3ZCX4 644 aa21■□□□□ 0.95
RPS28-202ENST00000449223 VWA3BQ502W6 1294 aa21■□□□□ 0.95
RPS28-202ENST00000449223 CRELD2Q6UXH1 353 aaPredicted RBP21■□□□□ 0.95
RPS28-202ENST00000449223 FAM228AQ86W67 206 aa21■□□□□ 0.95
RPS28-202ENST00000449223 CCDC155Q8N6L0 562 aa21■□□□□ 0.95
RPS28-202ENST00000449223 USP38Q8NB14 1042 aa21■□□□□ 0.95
RPS28-202ENST00000449223 ZSWIM2Q8NEG5 633 aa21■□□□□ 0.95
RPS28-202ENST00000449223 SLC35C1Q96A29 364 aa21■□□□□ 0.95
RPS28-202ENST00000449223 SAAL1Q96ER3 474 aa21■□□□□ 0.95
RPS28-202ENST00000449223 CCDC51Q96ER9 411 aa21■□□□□ 0.95
RPS28-202ENST00000449223 NOC4LQ9BVI4 516 aaKnown RBP21■□□□□ 0.95
RPS28-202ENST00000449223 CDT1Q9H211 546 aa21■□□□□ 0.95
RPS28-202ENST00000449223 NDST4Q9H3R1 872 aa21■□□□□ 0.95
RPS28-202ENST00000449223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21■□□□□ 0.95
RPS28-202ENST00000449223 PITPNM1O00562 1244 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 ADRB2P07550 413 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 PBX1P40424 430 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 FBXO47Q5MNV8 452 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 EEF1DP3Q658K8 133 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 NOTUMQ6P988 496 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 CBWD2Q8IUF1 395 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 DIS3LQ8TF46 1054 aaKnown RBP20.99■□□□□ 0.95
RPS28-202ENST00000449223 VPS16Q9H269 839 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 NOC2LQ9Y3T9 749 aaKnown RBP20.99■□□□□ 0.95
RPS28-202ENST00000449223 TANC1Q9C0D5 1861 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 ZNF233A6NK53 670 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 CTSHP09668 335 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 KYAT1Q16773 422 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 DCAF4L1Q3SXM0 396 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 ZNF618Q5T7W0 954 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 SLC27A1Q6PCB7 646 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 FAM43BQ6ZT52 329 aaPredicted RBP20.99■□□□□ 0.95
RPS28-202ENST00000449223 APBB1IPQ7Z5R6 666 aaPredicted RBP20.99■□□□□ 0.95
RPS28-202ENST00000449223 TMC2Q8TDI7 906 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 TCHPQ9BT92 498 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
RPS28-202ENST00000449223 CPSF3Q9UKF6 684 aaKnown RBP20.99■□□□□ 0.95
RPS28-202ENST00000449223 TLR3O15455 904 aaKnown RBP20.98■□□□□ 0.95
RPS28-202ENST00000449223 RPS6KA5O75582 802 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 FGFR4P22455 802 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 CLDN10P78369 228 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 CYP24A1Q07973 514 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 BFSP2Q13515 415 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 USP37Q86T82 979 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 CREBRFQ8IUR6 639 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 PARD3BQ8TEW8 1205 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 CPB2Q96IY4 423 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 ADPGKQ9BRR6 497 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 FAM213AQ9BRX8 229 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 CHST12Q9NRB3 414 aa20.98■□□□□ 0.95
RPS28-202ENST00000449223 A0A1W2PQC6 194 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 GOLGA8IPA6NC78 632 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 GOLGA8JA6NMD2 632 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 GPR182O15218 404 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 KRT13P13646 458 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 MATR3P43243 847 aaKnown RBP eCLIP20.97■□□□□ 0.95
RPS28-202ENST00000449223 KCNH2Q12809 1159 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 BRSK2Q8IWQ3 736 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 RDH13Q8NBN7 331 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 ERGIC2Q96RQ1 377 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 PPP1R9BQ96SB3 815 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 ANK1P16157 1881 aa20.97■□□□□ 0.95
RPS28-202ENST00000449223 RALGAPA2Q2PPJ7 1873 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 DCDC2CA8MYV0 355 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 PMM2O15305 246 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 TEX33O43247 280 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 VAMP7P51809 220 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 CCDC173Q0VFZ6 552 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 LPIN1Q14693 890 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 PSMD6Q15008 389 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 TMEM132AQ24JP5 1023 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 UBE2Q1Q7Z7E8 422 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 VSTM4Q8IW00 320 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 PLEKHO2Q8TD55 490 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 PAWRQ96IZ0 340 aaKnown RBP20.96■□□□□ 0.95
RPS28-202ENST00000449223 ERVK-5Q9HDB9 667 aa20.96■□□□□ 0.95
RPS28-202ENST00000449223 GTPBP10A4D1E9 387 aaKnown RBP20.95■□□□□ 0.94
RPS28-202ENST00000449223 PQBP1O60828 265 aaKnown RBP20.95■□□□□ 0.94
RPS28-202ENST00000449223 AFPP02771 609 aaKnown RBP20.95■□□□□ 0.94
RPS28-202ENST00000449223 SELPP16109 830 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 ACOT2P49753 483 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 ATN1P54259 1190 aaPredicted RBP20.95■□□□□ 0.94
RPS28-202ENST00000449223 ZBTB41Q5SVQ8 909 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 C1orf220Q5T0J3 134 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms