RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 AGXT2Q9BYV1 514 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 RHOBTB2Q9BYZ6 727 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 GPR62Q9BZJ7 368 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 FOXQ1Q9C009 403 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 CSRNP2Q9H175 543 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 ZDHHC7Q9NXF8 308 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 RGL1Q9NZL6 768 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 PARP2Q9UGN5 583 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 VAV3Q9UKW4 847 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 KCNJ14Q9UNX9 436 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 M0R2N6 131 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 ZBTB39O15060 712 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 CCNT1O60563 726 aaKnown RBP20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 TSPAN1O60635 241 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 FSHRP23945 695 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 CYP4A11Q02928 519 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 DSC1Q08554 894 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 TFDP1Q14186 410 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 EPHA7Q15375 998 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 GALNT17Q6IS24 598 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 CPLX2Q6PUV4 134 aaKnown RBP20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 TPH2Q8IWU9 490 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 C4orf19Q8IY42 314 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 RNF168Q8IYW5 571 aaPredicted RBP20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 RUBCNQ92622 972 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 SHDQ96IW2 340 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 CHST7Q9NS84 486 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 KLK14Q9P0G3 267 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 ADAM28Q9UKQ2 775 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 POLIQ9UNA4 740 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 GIT1Q9Y2X7 761 aa20.06■□□□□ 0.8
CHCHD3-203ENST00000448878 LRRN2O75325 713 aa20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 GPC5P78333 572 aa20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 HTR4Q13639 388 aa20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 MXD4Q14582 209 aaPredicted RBP20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 PRSS55Q6UWB4 352 aaPredicted RBP20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 GRASPQ7Z6J2 395 aaPredicted RBP20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 NEK8Q86SG6 692 aa20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 CDR2LQ86X02 465 aaPredicted RBP20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 CEP57Q86XR8 500 aa20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 DAGLBQ8NCG7 672 aa20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 CCDC51Q96ER9 411 aa20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 NXF3Q9H4D5 531 aaKnown RBP20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 ZSWIM4Q9H7M6 989 aa20.05■□□□□ 0.8
CHCHD3-203ENST00000448878 TDRD15B5MCY1 1934 aaKnown RBP20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 DCHS1Q96JQ0 3298 aa20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 ANHXE9PGG2 379 aa20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 ZMYND10O75800 440 aa20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 BAG4O95429 457 aaKnown RBP20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 PTENP60484 403 aa20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 CREMQ03060 361 aa20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 SNW1Q13573 536 aaKnown RBP20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 PUM1Q14671 1186 aaKnown RBP eCLIP20.04■□□□□ 0.82e-8■□□□□ 8.6
CHCHD3-203ENST00000448878 PCBP1Q15365 356 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 PJA1Q8NG27 643 aa20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 HASPINQ8TF76 798 aa20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 CCDC43Q96MW1 224 aaKnown RBP20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 RPP25Q9BUL9 199 aaKnown RBP20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 SPATA6Q9NWH7 488 aaPredicted RBP20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 FNIP2Q9P278 1114 aa20.04■□□□□ 0.8
CHCHD3-203ENST00000448878 POTEMA6NI47 508 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 KINO60870 393 aaKnown RBP20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 NPTXRO95502 500 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 EFEMP2O95967 443 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 NTHL1P78549 312 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 UBXN2BQ14CS0 331 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 LIN9Q5TKA1 542 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 LILRA6Q6PI73 481 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 POTEGQ6S5H5 508 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 PARM1Q6UWI2 310 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 RUFY3Q7L099 469 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 FGF14Q92915 247 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 KCNMB3Q9NPA1 279 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 SLC2A4RGQ9NR83 387 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 DLGAP2Q9P1A6 1054 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 CACNG4Q9UBN1 327 aa20.03■□□□□ 0.8
CHCHD3-203ENST00000448878 LAMTOR5O43504 91 aa20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 GCFC2P16383 781 aaKnown RBP20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 ARF4P18085 180 aaPredicted RBP20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 EVCP57679 992 aa20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 NPY5RQ15761 445 aa20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 PPM1LQ5SGD2 360 aa20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 PPP4R3AQ6IN85 833 aa20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 PIK3AP1Q6ZUJ8 805 aa20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 BCO2Q9BYV7 579 aa20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 NCDNQ9UBB6 729 aa20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 ZFP37Q9Y6Q3 630 aaPredicted RBP20.02■□□□□ 0.8
CHCHD3-203ENST00000448878 B4GALT5O43286 388 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 C1RP00736 705 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 GLULP15104 373 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 STARD6P59095 220 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 MBTD1Q05BQ5 628 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 GRIK3Q13003 919 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 SLC27A1Q6PCB7 646 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 CENPQQ7L2Z9 268 aaPredicted RBP20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 POTEDQ86YR6 584 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 HAS1Q92839 578 aa20.01■□□□□ 0.79
CHCHD3-203ENST00000448878 XPNPEP1Q9NQW7 623 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms