RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SLC27A1Q6PCB7 646 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 RTN4RL1Q86UN2 441 aaPredicted RBP12.68□□□□□ -0.38
LINC00408-201ENST00000447784 CRIPAKQ8N1N5 446 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 GOLGA5Q8TBA6 731 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 SCFD1Q8WVM8 642 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 LINC01599Q8WXQ3 324 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 ARNTL2Q8WYA1 636 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 CPB2Q96IY4 423 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 ACO2Q99798 780 aaKnown RBP12.68□□□□□ -0.38
LINC00408-201ENST00000447784 GBP3Q9H0R5 595 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 TMX1Q9H3N1 280 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 RGS18Q9NS28 235 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 ANKFY1Q9P2R3 1169 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 DACH1Q9UI36 760 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 MAPK8IP1Q9UQF2 711 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 GDAQ9Y2T3 454 aa12.68□□□□□ -0.38
LINC00408-201ENST00000447784 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 PSMA7O14818 248 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 PPP1R37O75864 691 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 UPP2O95045 317 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 HARSP12081 509 aaKnown RBP12.67□□□□□ -0.38
LINC00408-201ENST00000447784 IGFBP4P22692 258 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 HOXA11P31270 313 aaPredicted RBP12.67□□□□□ -0.38
LINC00408-201ENST00000447784 SNRPFP62306 86 aaKnown RBP12.67□□□□□ -0.38
LINC00408-201ENST00000447784 MORC3Q14149 939 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 HSP90AA2PQ14568 343 aaPredicted RBP12.67□□□□□ -0.38
LINC00408-201ENST00000447784 BMT2Q1RMZ1 405 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 MPZL3Q6UWV2 235 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 SLC24A5Q71RS6 500 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 EPM2AIP1Q7L775 607 aaPredicted RBP12.67□□□□□ -0.38
LINC00408-201ENST00000447784 TAS1R3Q7RTX0 852 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 NPAS4Q8IUM7 802 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 SMYD4Q8IYR2 804 aaPredicted RBP12.67□□□□□ -0.38
LINC00408-201ENST00000447784 GUF1Q8N442 669 aaKnown RBP12.67□□□□□ -0.38
LINC00408-201ENST00000447784 MLKLQ8NB16 471 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 RNF169Q8NCN4 708 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 KIAA0895Q8NCT3 520 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 GLIS3Q8NEA6 775 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 PGBD4Q96DM1 585 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 TSG101Q99816 390 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 STRA6Q9BX79 667 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 PDZD7Q9H5P4 517 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 CERS4Q9HA82 394 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 LMCD1Q9NZU5 365 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 TMEM63CQ9P1W3 806 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
LINC00408-201ENST00000447784 LRFN2Q9ULH4 789 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 COL4A6Q14031 1691 aa12.67□□□□□ -0.38
LINC00408-201ENST00000447784 MYH15Q9Y2K3 1946 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 EPOPA6NHQ4 379 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
LINC00408-201ENST00000447784 CALUO43852 315 aaPredicted RBP12.66□□□□□ -0.38
LINC00408-201ENST00000447784 DGKIO75912 1065 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 NPTXRO95502 500 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 PIGRP01833 764 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 STAG3L1P0CL83 205 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 MCF2P10911 925 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 KCNA1Q09470 495 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 DSC3Q14574 896 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 KYAT1Q16773 422 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
LINC00408-201ENST00000447784 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00408-201ENST00000447784 POMGNT1Q8WZA1 660 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 ZNF689Q96CS4 500 aaPredicted RBP12.66□□□□□ -0.38
LINC00408-201ENST00000447784 DHTKD1Q96HY7 919 aaPredicted RBP12.66□□□□□ -0.38
LINC00408-201ENST00000447784 RC3H2Q9HBD1 1191 aaKnown RBP12.66□□□□□ -0.38
LINC00408-201ENST00000447784 PCDHB7Q9Y5E2 793 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 PCDHB2Q9Y5E7 798 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
LINC00408-201ENST00000447784 A0A0U1RQF3 1178 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 RFXAPO00287 272 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
LINC00408-201ENST00000447784 MGEA5O60502 916 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 LPXNO60711 386 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 ITGA4P13612 1032 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
LINC00408-201ENST00000447784 PRCPP42785 496 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 YARSP54577 528 aaKnown RBP12.65□□□□□ -0.38
LINC00408-201ENST00000447784 NLRP12P59046 1061 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 NOLC1Q14978 699 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC00408-201ENST00000447784 KLHL10Q6JEL2 608 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 ARMCX5Q6P1M9 558 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
LINC00408-201ENST00000447784 SPRED2Q7Z698 418 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 ADSSL1Q8N142 457 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 NOC3LQ8WTT2 800 aaKnown RBP12.65□□□□□ -0.38
LINC00408-201ENST00000447784 MSTO1Q9BUK6 570 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 CCDC94Q9BW85 323 aaPredicted RBP12.65□□□□□ -0.38
LINC00408-201ENST00000447784 TRAIPQ9BWF2 469 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 TYW1Q9NV66 732 aaKnown RBP12.65□□□□□ -0.38
LINC00408-201ENST00000447784 ANO10Q9NW15 660 aa12.65□□□□□ -0.38
LINC00408-201ENST00000447784 CDH23Q9H251 3354 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms