RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SASH3O75995 380 aa18.87■□□□□ 0.61
SMC6-206ENST00000446852 GTF2H1P32780 548 aa18.87■□□□□ 0.61
SMC6-206ENST00000446852 NOP2P46087 812 aaKnown RBP18.87■□□□□ 0.61
SMC6-206ENST00000446852 TPCN2Q8NHX9 752 aa18.87■□□□□ 0.61
SMC6-206ENST00000446852 HELQQ8TDG4 1101 aa18.87■□□□□ 0.61
SMC6-206ENST00000446852 PSPC1Q8WXF1 523 aaKnown RBP18.87■□□□□ 0.61
SMC6-206ENST00000446852 FAM167AQ96KS9 214 aa18.87■□□□□ 0.61
SMC6-206ENST00000446852 SPATA33Q96N06 139 aa18.87■□□□□ 0.61
SMC6-206ENST00000446852 AGPAT1Q99943 283 aa18.87■□□□□ 0.61
SMC6-206ENST00000446852 TARS2Q9BW92 718 aaKnown RBP18.87■□□□□ 0.61
SMC6-206ENST00000446852 A0A0A6YYK5 440 aaPredicted RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 PDHXO00330 501 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 TNFAIP3P21580 790 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 ACOT2P49753 483 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 MKRN4PQ13434 485 aaPredicted RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 CRELD2Q6UXH1 353 aaPredicted RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 USP37Q86T82 979 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 DHX37Q8IY37 1157 aaKnown RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 FAM71AQ8IYT1 594 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 PRPF31Q8WWY3 499 aaKnown RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 BBXQ8WY36 941 aaPredicted RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 ZNF516Q92618 1163 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 VTI1AQ96AJ9 217 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 MS4A14Q96JA4 679 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 RAB20Q9NX57 234 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 AGO2Q9UKV8 859 aaKnown RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 TXNP10599 105 aaKnown RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 SCP2P22307 547 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 ITIH3Q06033 890 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 ENPEPQ07075 957 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 LONRF2Q1L5Z9 754 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 C15orf39Q6ZRI6 1047 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 SPATA4Q8NEY3 305 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 GPRC5AQ8NFJ5 357 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 HNRNPLLQ8WVV9 542 aaKnown RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 SHC3Q92529 594 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 SEPT11Q9NVA2 429 aaKnown RBP18.86■□□□□ 0.61
SMC6-206ENST00000446852 NCANO14594 1321 aa18.86■□□□□ 0.61
SMC6-206ENST00000446852 BTBD19C9JJ37 291 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 ADCY3O60266 1144 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 USP8P40818 1118 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 CLDN10P78369 228 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 PRPF4BQ13523 1007 aaKnown RBP18.85■□□□□ 0.61
SMC6-206ENST00000446852 PLCB4Q15147 1175 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 ZBTB41Q5SVQ8 909 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 LMBRD2Q68DH5 695 aaPredicted RBP18.85■□□□□ 0.61
SMC6-206ENST00000446852 WDR93Q6P2C0 686 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 ARMCX2Q7L311 632 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 ATP8B4Q8TF62 1192 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 KIAA1586Q9HCI6 787 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 ACP6Q9NPH0 428 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 ANKFY1Q9P2R3 1169 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 PTPRJQ12913 1337 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 PCNTO95613 3336 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 TTLL13PA6NNM8 815 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 SGPL1O95470 568 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 ABCB4P21439 1286 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 PSMD6Q15008 389 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 IFI16Q16666 785 aaKnown RBP18.85■□□□□ 0.61
SMC6-206ENST00000446852 CCDC181Q5TID7 509 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 PLPPR4Q7Z2D5 763 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 EPS8L1Q8TE68 723 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 TMEM134Q9H6X4 195 aa18.85■□□□□ 0.61
SMC6-206ENST00000446852 NOCTQ9UK39 431 aaKnown RBP18.85■□□□□ 0.61
SMC6-206ENST00000446852 CCL15-CCL14A0A0B4J2E2 113 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 TMEM253P0C7T8 217 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 CETPP11597 493 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 MFAP3P55082 362 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 CCL15Q16663 113 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 PTPROQ16827 1216 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 BEND6Q5SZJ8 279 aaPredicted RBP18.84■□□□□ 0.61
SMC6-206ENST00000446852 LRRC71Q8N4P6 559 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 BRI3BPQ8WY22 251 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 TATDN2Q93075 761 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 NT5C1BQ96P26 610 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 PI4K2AQ9BTU6 479 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 FUT8Q9BYC5 575 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 SUGCTQ9HAC7 445 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 PDE11AQ9HCR9 933 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 ABCB6Q9NP58 842 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 OSGEPQ9NPF4 335 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 ADGRA2Q96PE1 1338 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 A0A0B4J269 797 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 LOC102724159A0A0B4J2E5 919 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 UNCXA6NJT0 531 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 CYP26A1O43174 497 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 PWP2Q15269 919 aaKnown RBP18.84■□□□□ 0.61
SMC6-206ENST00000446852 SLFN11Q7Z7L1 901 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 NOP9Q86U38 636 aaKnown RBP18.84■□□□□ 0.61
SMC6-206ENST00000446852 MMGT1Q8N4V1 131 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 GTF3C2Q8WUA4 911 aaPredicted RBP18.84■□□□□ 0.61
SMC6-206ENST00000446852 TRAPPC12Q8WVT3 735 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 ARHGEF26Q96DR7 871 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 PPME1Q9Y570 386 aa18.84■□□□□ 0.61
SMC6-206ENST00000446852 ASB14A6NK59 587 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 CHRNB2P17787 502 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 ADORA2AP29274 412 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 TTLL4Q14679 1199 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 ZNF792Q3KQV3 632 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 GJC2Q5T442 439 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms