RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 M0QYV0 167 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 MSCO60682 206 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 PAX3P23760 479 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 RBL2Q08999 1139 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 UGP2Q16851 508 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 EMBQ6PCB8 327 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 MGARPQ8TDB4 240 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 CAPS2Q9BXY5 557 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 DEFB129Q9H1M3 183 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 EML4Q9HC35 981 aaKnown RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 EVA1BQ9NVM1 165 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 SYNPO2Q9UMS6 1093 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 A0A1W2PQC6 194 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 C17orf102A2RUQ5 167 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 CACNB3P54284 484 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 IMPG1Q17R60 797 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 ZNF827Q17R98 1081 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 FBXO33Q7Z6M2 555 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 WDR75Q8IWA0 830 aaKnown RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 TSPAN17Q96FV3 270 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 EIF4A3P38919 411 aaKnown RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 MOXD1Q6UVY6 613 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 FOXP3Q9BZS1 431 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 FAM217BQ9NTX9 383 aaPredicted RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 KANSL3Q9P2N6 904 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 ANO9A1A5B4 782 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 CXCL11O14625 94 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 SLC16A4O15374 487 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 CHRNA5P30532 468 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 INPP1P49441 399 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 PRAMEP78395 509 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 PTPAQ15257 358 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 PDXDC1Q6P996 788 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 TRAPPC11Q7Z392 1133 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 OPTNQ96CV9 577 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 NDEL1Q9GZM8 345 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 CFAP69A5D8W1 941 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 KPNA1P52294 538 aaPredicted RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 PIGHQ14442 188 aaPredicted RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 STAG2Q8N3U4 1231 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 RNF149Q8NC42 400 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 RASSF4Q9H2L5 321 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 KIAA1257Q9ULG3 409 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 GPR75-ASB3A0A0A6YYF3 556 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 ATP5HO75947 161 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 ODC1P11926 461 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 EPHX2P34913 555 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 ALDH7A1P49419 539 aaKnown RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 GTF2A1P52655 376 aaPredicted RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 ACAD11Q709F0 780 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 PLEKHH3Q7Z736 793 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 ZNF557Q8N988 423 aaPredicted RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 OSCP1Q8WVF1 389 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 TMEM169Q96HH4 297 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 SPATA16Q9BXB7 569 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 MOV10L1Q9BXT6 1211 aaKnown RBP9.07□□□□□ -0.96
PTPN3-204ENST00000446349 MOSPD1Q9UJG1 213 aa9.07□□□□□ -0.96
PTPN3-204ENST00000446349 LRRIQ3A6PVS8 624 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 PSMD14O00487 310 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 STRNO43815 780 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 SMIM24O75264 130 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 OXCT1P55809 520 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 ELF2Q15723 593 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 USP17L6PQ6QN14 398 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 CCDC197Q8NCU1 140 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 NEDD4P46934 1319 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 PITPNM2Q9BZ72 1349 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 PLS3P13797 630 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 PI4K2BG5E9Z4 385 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 LRG1P02750 347 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 CLTAP09496 248 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 ETFBP38117 255 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 ACCSLQ4AC99 568 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 PDZD8Q8NEN9 1154 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 FGD4Q96M96 766 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 ZDHHC15Q96MV8 337 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 MKNK1Q9BUB5 465 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 NDUFB10O96000 172 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 TGFB3P10600 412 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 MUM1Q2TAK8 710 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 TTC19Q6DKK2 380 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 EHD4Q9H223 541 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 GBA2Q9HCG7 927 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 PACSIN2Q9UNF0 486 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 DOLKQ9UPQ8 538 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 GOLGA8IPA6NC78 632 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 APOL1O14791 398 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 HARS2P49590 506 aaKnown RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 MTHFD1LQ6UB35 978 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 MCUQ8NE86 351 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 FAM129AQ9BZQ8 928 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 SLIT1O75093 1534 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 FAM187AA6NFU0 413 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 TXNDC9O14530 226 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 MAP4P27816 1152 aaKnown RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 CHRNA3P32297 505 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 ROR1Q01973 937 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms