RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ADI1Q9BV57 179 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 C12orf65Q9H3J6 166 aaKnown RBP5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 GPRC5DQ9NZD1 345 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 ZIM2Q9NZV7 527 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 IP6K2Q9UHH9 426 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 LIMCH1Q9UPQ0 1083 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 NPEPPSL1A6NEC2 478 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 FAM171A2A8MVW0 826 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 WNT10BO00744 389 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 ADCY6O43306 1168 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 FOXS1O43638 330 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 GYPEP15421 78 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZSCAN20P17040 1043 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 RPS19P39019 145 aaKnown RBP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 KIF23Q02241 960 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 OS9Q13438 667 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 HDAC1Q13547 482 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 HLTFQ14527 1009 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 NFIXQ14938 502 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 KRT40Q6A162 431 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 CIR1Q86X95 450 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 TRMT2AQ8IZ69 625 aaKnown RBP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 HSPBAP1Q96EW2 488 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 BORCS6Q96GS4 357 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 ARNT2Q9HBZ2 717 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 PNMA8BQ9ULN7 279 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 ANKRD6Q9Y2G4 727 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 COMMD10Q9Y6G5 202 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZNF536O15090 1300 aa5.71□□□□□ -1.5
HMGB1P48-201ENST00000446155 ATRNL1Q5VV63 1379 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 A0A1W2PRX2 142 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 UBE2QL1A1L167 161 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 CCDC154A6NI56 674 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 ITGA10O75578 1167 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 MYL1P05976 194 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 PF4V1P10720 104 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 ECHS1P30084 290 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 ADSLP30566 484 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 GUCY1A2P33402 732 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 SREBF1P36956 1147 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 CASRP41180 1078 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 SLC16A1P53985 500 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 DUSP2Q05923 314 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 MRPL49Q13405 166 aaKnown RBP5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 C3orf36Q3SXR2 165 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 RRP12Q5JTH9 1297 aaKnown RBP5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 FUKQ8N0W3 1084 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 PRR18Q8N4B5 295 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 JPH3Q8WXH2 748 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 DPF2Q92785 391 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 CSRNP2Q9H175 543 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 CD248Q9HCU0 757 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZNF180Q9UJW8 692 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 CNOT11Q9UKZ1 510 aaKnown RBP5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZBTB21Q9ULJ3 1066 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 DNM3Q9UQ16 869 aa5.7□□□□□ -1.5
HMGB1P48-201ENST00000446155 STC2O76061 302 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 ENDOD1O94919 500 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 AKAP5P24588 427 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 FOXL1Q12952 345 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 NOMO1Q15155 1222 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 FAM111BQ6SJ93 734 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 FAM180AQ6UWF9 173 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 GLB1LQ6UWU2 654 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 KRTAP1-3Q8IUG1 177 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 GIMAP8Q8ND71 665 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 TTC8Q8TAM2 541 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 SLC39A13Q96H72 371 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 WWC2-AS2Q96NR7 200 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 TCF25Q9BQ70 676 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 BDH2Q9BUT1 245 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 KCNH6Q9H252 994 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 SLC12A5Q9H2X9 1139 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 PLA2G3Q9NZ20 509 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 RCAN3Q9UKA8 241 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 INTUQ9ULD6 942 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZFR2Q9UPR6 939 aaKnown RBP5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 JAG2Q9Y219 1238 aa5.69□□□□□ -1.5
HMGB1P48-201ENST00000446155 IL33O95760 270 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 AMY1AP04745 511 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 POU2F2P09086 479 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 VCAM1P19320 739 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 GZMKP49863 264 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 NPEPPSP55786 919 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 ATP8B2P98198 1209 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 ICAM4Q14773 271 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 GRM7Q14831 915 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 PRAMEF14Q5SWL7 426 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 SYCP2LQ5T4T6 812 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 FAM102BQ5T8I3 360 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 NXNQ6DKJ4 435 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 PPP4R4Q6NUP7 873 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 Q6ZSN1 163 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZNF572Q7Z3I7 529 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 POLNQ7Z5Q5 900 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 APBB1IPQ7Z5R6 666 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 SAMD3Q8N6K7 520 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 Q8TCH9 128 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 IL17RAQ96F46 866 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms