RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ZNF667Q5HYK9 610 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 MXRA8Q9BRK3 442 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 TRIM55Q9BYV6 548 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 ZWILCHQ9H900 591 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 BAG2O95816 211 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 ARL1P40616 181 aaPredicted RBP17.72■□□□□ 0.43
TCOF1-206ENST00000445265 AMPD2Q01433 879 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 TFDP2Q14188 446 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 KCTD2Q14681 263 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 GADL1Q6ZQY3 521 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 HDAC7Q8WUI4 952 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 LRRC37BQ96QE4 947 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 TTC7AQ9ULT0 858 aaPredicted RBP17.72■□□□□ 0.43
TCOF1-206ENST00000445265 ZNF394Q53GI3 561 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 OR6B2Q6IFH4 312 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 MTRQ99707 1265 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 PRMT1Q99873 361 aaKnown RBP17.72■□□□□ 0.43
TCOF1-206ENST00000445265 THAP2Q9H0W7 228 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 POLR3FQ9H1D9 316 aaPredicted RBP17.72■□□□□ 0.43
TCOF1-206ENST00000445265 AGO2Q9UKV8 859 aaKnown RBP17.72■□□□□ 0.43
TCOF1-206ENST00000445265 FRMD3A2A2Y4 597 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 KRT37O76014 449 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 GPS1Q13098 491 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 STXBP2Q15833 593 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 RPF1Q9H9Y2 349 aaKnown RBP17.72■□□□□ 0.43
TCOF1-206ENST00000445265 OLFML3Q9NRN5 406 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 PARVAQ9NVD7 372 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 ARL2BPQ9Y2Y0 163 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 KRT7P08729 469 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 SRGAP2CP0DJJ0 459 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 FOXP3Q9BZS1 431 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 DDX56Q9NY93 547 aaKnown RBP17.71■□□□□ 0.43
TCOF1-206ENST00000445265 RBAKQ9NYW8 714 aaPredicted RBP17.71■□□□□ 0.43
TCOF1-206ENST00000445265 GTF3C4Q9UKN8 822 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 TXNDC9O14530 226 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 DGAT1O75907 488 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 ESRRAP11474 423 aaPredicted RBP17.71■□□□□ 0.43
TCOF1-206ENST00000445265 IGBP1P78318 339 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 MIIPQ5JXC2 388 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
TCOF1-206ENST00000445265 CYFIP1Q7L576 1253 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 SLC30A5Q8TAD4 765 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 FAM167AQ96KS9 214 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 NUDT12Q9BQG2 462 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 WNT7AO00755 349 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 SPATA21Q7Z572 469 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 RPS6KC1Q96S38 1066 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 CAMTA1Q9Y6Y1 1673 aa17.71■□□□□ 0.43
TCOF1-206ENST00000445265 TCP11X1B4DZS4 312 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 ZBED1O96006 694 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 HNRNPH3P31942 346 aaKnown RBP17.7■□□□□ 0.42
TCOF1-206ENST00000445265 SLC12A2P55011 1212 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 SLC29A2Q14542 456 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 MAPK6Q16659 721 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 SUPT20HL1Q3ZLR7 823 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 ZSWIM1Q9BR11 485 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 TMEM8AQ9HCN3 771 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 CAPN9O14815 690 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 FNTAP49354 379 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 AP3M2P53677 418 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 OSTNP61366 133 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 RCN2Q14257 317 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 ATG16L1Q676U5 607 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 ECT2Q9H8V3 914 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 SSX2IPQ9Y2D8 614 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
TCOF1-206ENST00000445265 AFF2P51816 1311 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 PDE2AO00408 941 aaPredicted RBP17.7■□□□□ 0.42
TCOF1-206ENST00000445265 FOXN3O00409 490 aaPredicted RBP17.7■□□□□ 0.42
TCOF1-206ENST00000445265 TAP1Q03518 808 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 COBLL1Q53SF7 1204 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 TEX2Q8IWB9 1127 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 ZNF699Q32M78 642 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 GMCL1Q96IK5 515 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 ETNK1Q9HBU6 452 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 PCDHB2Q9Y5E7 798 aa17.7■□□□□ 0.42
TCOF1-206ENST00000445265 F8VZ95 297 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 SLC13A5Q86YT5 568 aaPredicted RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 THNSL1Q8IYQ7 743 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 NME8Q8N427 588 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 ATP11CQ8NB49 1132 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 LPAR1Q92633 364 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 LMNAP02545 664 aaKnown RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 BAG6P46379 1132 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 NFIAQ12857 509 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 GEN1Q17RS7 908 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 THOC1Q96FV9 657 aaKnown RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 CLEC11AQ9Y240 323 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 NALCNQ8IZF0 1738 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 WTIPA6NIX2 430 aaPredicted RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 WDR46O15213 610 aaKnown RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 COILP38432 576 aaPredicted RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 COL23A1Q86Y22 540 aaPredicted RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 IRF2BP1Q8IU81 584 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 C4orf32Q8N8J7 132 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 NCAPGQ9BPX3 1015 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 ZNF302Q9NR11 478 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 PCDHGC5Q9Y5F6 944 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms