RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 EDN1P05305 212 aa18.87■□□□□ 0.61
LIME1-202ENST00000444951 IBSPP21815 317 aaPredicted RBP18.87■□□□□ 0.61
LIME1-202ENST00000444951 EPM2AIP1Q7L775 607 aaPredicted RBP18.87■□□□□ 0.61
LIME1-202ENST00000444951 CDR2LQ86X02 465 aaPredicted RBP18.87■□□□□ 0.61
LIME1-202ENST00000444951 TRIML1Q8N9V2 468 aa18.87■□□□□ 0.61
LIME1-202ENST00000444951 SP7Q8TDD2 431 aaPredicted RBP18.87■□□□□ 0.61
LIME1-202ENST00000444951 SCFD1Q8WVM8 642 aa18.87■□□□□ 0.61
LIME1-202ENST00000444951 FZD8Q9H461 694 aa18.87■□□□□ 0.61
LIME1-202ENST00000444951 ST6GALNAC4Q9H4F1 302 aa18.87■□□□□ 0.61
LIME1-202ENST00000444951 PADI3Q9ULW8 664 aa18.87■□□□□ 0.61
LIME1-202ENST00000444951 COG5Q9UP83 839 aa18.87■□□□□ 0.61
LIME1-202ENST00000444951 GPR182O15218 404 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 EIF3DO15371 548 aaKnown RBP eCLIP18.86■□□□□ 0.61
LIME1-202ENST00000444951 TSPAN1O60635 241 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 PPP1R37O75864 691 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 LETM1O95202 739 aaPredicted RBP18.86■□□□□ 0.61
LIME1-202ENST00000444951 PRCPP42785 496 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 MATR3P43243 847 aaKnown RBP eCLIP18.86■□□□□ 0.61
LIME1-202ENST00000444951 NLRP12P59046 1061 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 NCBP1Q09161 790 aaKnown RBP18.86■□□□□ 0.61
LIME1-202ENST00000444951 ALCAMQ13740 583 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 KLHL10Q6JEL2 608 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 SEPT8Q92599 483 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 HLA-CQ95604 372 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 TARS2Q9BW92 718 aaKnown RBP18.86■□□□□ 0.61
LIME1-202ENST00000444951 STRA6Q9BX79 667 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 MRPL4Q9BYD3 311 aaKnown RBP18.86■□□□□ 0.61
LIME1-202ENST00000444951 IFIH1Q9BYX4 1025 aaKnown RBP18.86■□□□□ 0.61
LIME1-202ENST00000444951 ERVK-5Q9HDB9 667 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 PIN4Q9Y237 131 aaKnown RBP18.86■□□□□ 0.61
LIME1-202ENST00000444951 INSL6Q9Y581 213 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 NLRC5Q86WI3 1866 aa18.86■□□□□ 0.61
LIME1-202ENST00000444951 MYO7AQ13402 2215 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 ACKR2O00590 384 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 HNRNPDLO14979 420 aaKnown RBP18.85■□□□□ 0.61
LIME1-202ENST00000444951 UPP2O95045 317 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 CD44P16070 742 aaKnown RBP18.85■□□□□ 0.61
LIME1-202ENST00000444951 HOXD13P35453 343 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 LIG4P49917 911 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 STIM1Q13586 685 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 AMHR2Q16671 573 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 AAK1Q2M2I8 961 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 DPCR1Q3MIW9 517 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 MAP4K3Q8IVH8 894 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 ZNF507Q8TCN5 953 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 TOP1MTQ969P6 601 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 HVCN1Q96D96 273 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 LMCD1Q9NZU5 365 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 EXOC7Q9UPT5 735 aa18.85■□□□□ 0.61
LIME1-202ENST00000444951 ATG2AQ2TAZ0 1938 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 TISP43B9A030 160 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 KIF20AO95235 890 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 HARSP12081 509 aaKnown RBP18.84■□□□□ 0.61
LIME1-202ENST00000444951 ARF4P18085 180 aaPredicted RBP18.84■□□□□ 0.61
LIME1-202ENST00000444951 ABCD1P33897 745 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 TYRO3Q06418 890 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 FAM187BQ17R55 369 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 ATF7IP2Q5U623 682 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 PPP4R3CPQ6ZMV5 832 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 ZBTB33Q86T24 672 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 FBXO22Q8NEZ5 403 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 TCHPQ9BT92 498 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 GTPBP4Q9BZE4 634 aaKnown RBP18.84■□□□□ 0.61
LIME1-202ENST00000444951 ANKFY1Q9P2R3 1169 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 CTNND2Q9UQB3 1225 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 SQORQ9Y6N5 450 aa18.84■□□□□ 0.61
LIME1-202ENST00000444951 UBE4BO95155 1302 aa18.83■□□□□ 0.61
LIME1-202ENST00000444951 CNTNAP2Q9UHC6 1331 aa18.83■□□□□ 0.61
LIME1-202ENST00000444951 PPP1R3GB7ZBB8 358 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 ANKRD63C9JTQ0 380 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 COL9A1P20849 921 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 SCP2P22307 547 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 STX1AQ16623 288 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 KNOP1Q1ED39 458 aaKnown RBP18.83■□□□□ 0.6
LIME1-202ENST00000444951 EPC2Q52LR7 807 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 ADSSL1Q8N142 457 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 GUF1Q8N442 669 aaKnown RBP18.83■□□□□ 0.6
LIME1-202ENST00000444951 NOC3LQ8WTT2 800 aaKnown RBP18.83■□□□□ 0.6
LIME1-202ENST00000444951 ZBTB45Q96K62 511 aaPredicted RBP18.83■□□□□ 0.6
LIME1-202ENST00000444951 PRIMPOLQ96LW4 560 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 YME1L1Q96TA2 773 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 ACO2Q99798 780 aaKnown RBP18.83■□□□□ 0.6
LIME1-202ENST00000444951 TMX1Q9H3N1 280 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 TMEM206Q9H813 350 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 AGPAT5Q9NUQ2 364 aa18.83■□□□□ 0.6
LIME1-202ENST00000444951 COL4A6Q14031 1691 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 ZMYM2Q9UBW7 1377 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 TULP1O00294 542 aaPredicted RBP18.82■□□□□ 0.6
LIME1-202ENST00000444951 ZSCAN20P17040 1043 aaPredicted RBP18.82■□□□□ 0.6
LIME1-202ENST00000444951 HOXA11P31270 313 aaPredicted RBP18.82■□□□□ 0.6
LIME1-202ENST00000444951 STX17P56962 302 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 BMT2Q1RMZ1 405 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 EEF1DP3Q658K8 133 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 TWF2Q6IBS0 349 aaKnown RBP18.82■□□□□ 0.6
LIME1-202ENST00000444951 SLC39A4Q6P5W5 647 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 NOTUMQ6P988 496 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 MLKLQ8NB16 471 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 NELFBQ8WX92 580 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 GBP3Q9H0R5 595 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 PDZD7Q9H5P4 517 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms