RNA–Protein interactions for RNA: ENST00000444396.5

NR1H3-212, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-212ENST00000444396 RSAD1Q9HA92 442 aa20.57■□□□□ 0.88
NR1H3-212ENST00000444396 TRIOBPQ9H2D6 2365 aa20.57■□□□□ 0.88
NR1H3-212ENST00000444396 CARNS1A5YM72 827 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 KIF20AO95235 890 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 RABGGTBP53611 331 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 STK4Q13043 487 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 COBLL1Q53SF7 1204 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 CLLU1OSQ5K130 101 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 SLC39A4Q6P5W5 647 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 GLB1LQ6UWU2 654 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 CDR2LQ86X02 465 aaPredicted RBP20.56■□□□□ 0.88
NR1H3-212ENST00000444396 KIAA0895Q8NCT3 520 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 SCFD1Q8WVM8 642 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 HPS3Q969F9 1004 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 NXF3Q9H4D5 531 aaKnown RBP20.56■□□□□ 0.88
NR1H3-212ENST00000444396 CGNQ9P2M7 1197 aaKnown RBP20.56■□□□□ 0.88
NR1H3-212ENST00000444396 USP20Q9Y2K6 914 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 YBX2Q9Y2T7 364 aaKnown RBP20.56■□□□□ 0.88
NR1H3-212ENST00000444396 PCDHA5Q9Y5H7 936 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 GBF1Q92538 1859 aa20.56■□□□□ 0.88
NR1H3-212ENST00000444396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.55■□□□□ 0.88
NR1H3-212ENST00000444396 A0A0B4J269 797 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 KIAA0391O15091 583 aaKnown RBP20.55■□□□□ 0.88
NR1H3-212ENST00000444396 MBD3O95983 291 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 GARTP22102 1010 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 PBX2P40425 430 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 FAM117BQ6P1L5 589 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 ABI1Q8IZP0 508 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 GLIS3Q8NEA6 775 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 TMEM174Q8WUU8 243 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 CLP1Q92989 425 aaKnown RBP20.55■□□□□ 0.88
NR1H3-212ENST00000444396 SMARCE1Q969G3 411 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 TIFAQ96CG3 184 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 SAMD11Q96NU1 681 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 CASD1Q96PB1 797 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 TCHPQ9BT92 498 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 SLC39A2Q9NP94 309 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 KANSL3Q9P2N6 904 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 RWDD3Q9Y3V2 267 aa20.55■□□□□ 0.88
NR1H3-212ENST00000444396 FNDC1Q4ZHG4 1894 aaPredicted RBP20.55■□□□□ 0.88
NR1H3-212ENST00000444396 SOX1O00570 391 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-212ENST00000444396 FAM189A1O60320 539 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 OFD1O75665 1012 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 PRPF6O94906 941 aaKnown RBP20.54■□□□□ 0.88
NR1H3-212ENST00000444396 CA3P07451 260 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 FGFR1P11362 822 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 HOXD13P35453 343 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 KCNA1Q09470 495 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 BTG3Q14201 252 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-212ENST00000444396 LRRC43Q8N309 656 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 FIBCD1Q8N539 461 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 CCDC94Q9BW85 323 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-212ENST00000444396 GBP3Q9H0R5 595 aa20.54■□□□□ 0.88
NR1H3-212ENST00000444396 LINC01553A4QN01 128 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 OGTO15294 1046 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 MCM4P33991 863 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 KNOP1Q1ED39 458 aaKnown RBP20.53■□□□□ 0.88
NR1H3-212ENST00000444396 XKR4Q5GH76 650 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 NOMO2Q5JPE7 1267 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 ZNF658Q5TYW1 1059 aaPredicted RBP20.53■□□□□ 0.88
NR1H3-212ENST00000444396 C12orf56Q8IXR9 622 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 SYCP3Q8IZU3 236 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 GUF1Q8N442 669 aaKnown RBP20.53■□□□□ 0.88
NR1H3-212ENST00000444396 RNF169Q8NCN4 708 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 GOLGA5Q8TBA6 731 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 LPPQ93052 612 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 ZBTB45Q96K62 511 aaPredicted RBP20.53■□□□□ 0.88
NR1H3-212ENST00000444396 HAPLN2Q9GZV7 340 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 RNF39Q9H2S5 420 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 CLSTN2Q9H4D0 955 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 SLC28A3Q9HAS3 691 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 TOPORSQ9NS56 1045 aaPredicted RBP20.53■□□□□ 0.88
NR1H3-212ENST00000444396 ANKFY1Q9P2R3 1169 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 HES2Q9Y543 173 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 LAMA3Q16787 3333 aa20.53■□□□□ 0.88
NR1H3-212ENST00000444396 LCHNA4D1U4 455 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 TBKBP1A7MCY6 615 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 MEIS3P2A8K0S8 358 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 ANKRD63C9JTQ0 380 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 RECQL4O94761 1208 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 CLTAP09496 248 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 LINC00271P0C7V0 271 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 PTMSP20962 102 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 ADSSP30520 456 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 PPP1R2P41236 205 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 TAP1Q03518 808 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 HSP90AA2PQ14568 343 aaPredicted RBP20.52■□□□□ 0.88
NR1H3-212ENST00000444396 TRIML1Q8N9V2 468 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 URGCPQ8TCY9 931 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 HELQQ8TDG4 1101 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 TSPAN18Q96SJ8 248 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 NKX2-4Q9H2Z4 354 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 SNTG2Q9NY99 539 aa20.52■□□□□ 0.88
NR1H3-212ENST00000444396 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.52■□□□□ 0.88
NR1H3-212ENST00000444396 ARL5CA6NH57 179 aa20.51■□□□□ 0.87
NR1H3-212ENST00000444396 TGFB1I1O43294 461 aa20.51■□□□□ 0.87
NR1H3-212ENST00000444396 LDHAP00338 332 aaKnown RBP20.51■□□□□ 0.87
NR1H3-212ENST00000444396 ADRB2P07550 413 aa20.51■□□□□ 0.87
NR1H3-212ENST00000444396 MYOGP15173 224 aa20.51■□□□□ 0.87
NR1H3-212ENST00000444396 FXR1P51114 621 aaKnown RBP eCLIP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms