RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 CALML4Q96GE6 196 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 ZFP42Q96MM3 310 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 KIFC3Q9BVG8 833 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 ARHGAP28Q9P2N2 729 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 GTF3C3Q9Y5Q9 886 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 CXCL14O95715 111 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 HOXB8P17481 243 aaPredicted RBP20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 AKAP5P24588 427 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 SCNN1GP51170 649 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 SLC12A3P55017 1021 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 GRIK3Q13003 919 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 TMEM132AQ24JP5 1023 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 DCAF4L1Q3SXM0 396 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 ADHFE1Q8IWW8 467 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 SPIRE2Q8WWL2 714 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 POP1Q99575 1024 aaKnown RBP20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 APOL6Q9BWW8 343 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 POLD4Q9HCU8 107 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 MIOSQ9NXC5 875 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 BARX2Q9UMQ3 279 aaPredicted RBP20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 TNFSF13BQ9Y275 285 aa20.74■□□□□ 0.91
ATPAF2-201ENST00000444058 C19orf67A6NJJ6 358 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 CCDC169A6NNP5 214 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 PLA2G4BP0C869 781 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 PDIA4P13667 645 aaKnown RBP20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 ZP2Q05996 745 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 RESTQ13127 1097 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 CLUL1Q15846 466 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 ATF7IP2Q5U623 682 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 VN1R3Q9BXE9 311 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 ZSCAN16Q9H4T2 348 aaPredicted RBP20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 CD320Q9NPF0 282 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 KMT5AQ9NQR1 393 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 PARP2Q9UGN5 583 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 MTMR6Q9Y217 621 aa20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 MORC2Q9Y6X9 1032 aaPredicted RBP20.73■□□□□ 0.91
ATPAF2-201ENST00000444058 EFEMP2O95967 443 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 EDN1P05305 212 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 PLS3P13797 630 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 SMTNP53814 917 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 PTPAQ15257 358 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 NT5DC1Q5TFE4 455 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 ANKRD54Q6NXT1 300 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 CASP10Q92851 521 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 KCNN1Q92952 543 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 RPS6KC1Q96S38 1066 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 COLEC11Q9BWP8 271 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 CCSER1Q9C0I3 900 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 MARCH5Q9NX47 278 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 SSX2IPQ9Y2D8 614 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 HCFC2Q9Y5Z7 792 aa20.72■□□□□ 0.91
ATPAF2-201ENST00000444058 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 STX6O43752 255 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 CLASP2O75122 1294 aaKnown RBP20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 SOD2P04179 222 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 SSBP05455 408 aaKnown RBP eCLIP20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 LIG1P18858 919 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 SCP2P22307 547 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 SSTR3P32745 418 aaPredicted RBP20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 OR1G1P47890 313 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 RBM10P98175 930 aaKnown RBP20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 PTPN14Q15678 1187 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 EEF1DP3Q658K8 133 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 PPFIBP1Q86W92 1011 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 RNF168Q8IYW5 571 aaPredicted RBP20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 TMEM87AQ8NBN3 555 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 PLIN2Q99541 437 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 C1QTNF1Q9BXJ1 281 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 MRPL4Q9BYD3 311 aaKnown RBP20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 PTPRHQ9HD43 1115 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 SNTG2Q9NY99 539 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 ODF2LQ9ULJ1 636 aa20.71■□□□□ 0.91
ATPAF2-201ENST00000444058 LILRB3O75022 631 aa20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 GPR65Q8IYL9 337 aa20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 SUSD6Q92537 303 aa20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 ACO2Q99798 780 aaKnown RBP20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 S1PR5Q9H228 398 aa20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 MRPL17Q9NRX2 175 aaKnown RBP20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 KLK14Q9P0G3 267 aa20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 LARSQ9P2J5 1176 aaKnown RBP20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 USP20Q9Y2K6 914 aa20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 PRG3Q9Y2Y8 225 aaPredicted RBP20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 USP15Q9Y4E8 981 aaPredicted RBP20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 SRPRBQ9Y5M8 271 aaKnown RBP20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 CLIC4Q9Y696 253 aa20.7■□□□□ 0.9
ATPAF2-201ENST00000444058 SFI1A8K8P3 1242 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 H0YCG3 227 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 RECQL4O94761 1208 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 BRD1O95696 1058 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 GRIN1Q05586 938 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 TUSC3Q13454 348 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 ARSHQ5FYA8 562 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 SYCE2Q6PIF2 218 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 TAS1R3Q7RTX0 852 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 TMEM161BQ8NDZ6 487 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 HERC2P3Q9BVR0 1158 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 EMILIN2Q9BXX0 1053 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 BLOC1S4Q9NUP1 217 aa20.69■□□□□ 0.9
ATPAF2-201ENST00000444058 PI4K2BG5E9Z4 385 aa20.68■□□□□ 0.9
ATPAF2-201ENST00000444058 PTGESO14684 152 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms