RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 NRKQ7Z2Y5 1582 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 CASQ2O14958 399 aaPredicted RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 TMEM253P0C7T8 217 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 RGS2P41220 211 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 TMED10P49755 219 aaKnown RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 ITGA8P53708 1063 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 LSAMPQ13449 338 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 HP1BP3Q5SSJ5 553 aaPredicted RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 WDR60Q8WVS4 1066 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 TBX22Q9Y458 520 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ABCA9Q8IUA7 1624 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 NEXMIFQ5QGS0 1516 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 CLDN3O15551 220 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ECE2O60344 883 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 CYP2D6P10635 497 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 GM2AP17900 193 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 GJA8P48165 433 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 MTTPP55157 894 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 DNAJC3Q13217 504 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 EDRF1Q3B7T1 1238 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ZSWIM1Q9BR11 485 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 SUGT1Q9Y2Z0 365 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 ZNF76P36508 570 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 SLC4A8Q2Y0W8 1093 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 KLC3Q6P597 504 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 MTBPQ96DY7 904 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 MXD3Q9BW11 206 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 EPB41L4BQ9H329 900 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 PPCSQ9HAB8 311 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 UBE2TQ9NPD8 197 aaPredicted RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 CHKBQ9Y259 395 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 OAS1P00973 400 aaKnown RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 IFNB1P01574 187 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 MAGEA4P43358 317 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 PDE1CQ14123 709 aaPredicted RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 MIER3Q7Z3K6 550 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 SCUBE1Q8IWY4 988 aa5.34□□□□□ -1.55
HERC1-201ENST00000443617 UBE2OQ9C0C9 1292 aaKnown RBP5.34□□□□□ -1.55
HERC1-201ENST00000443617 GSC2O15499 205 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 PPIDQ08752 370 aaKnown RBP5.34□□□□□ -1.56
HERC1-201ENST00000443617 GRB10Q13322 594 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 NPY5RQ15761 445 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 KNOP1Q1ED39 458 aaKnown RBP5.34□□□□□ -1.56
HERC1-201ENST00000443617 MIGA2Q7L4E1 593 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 RHOT2Q8IXI1 618 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 ZNF148Q9UQR1 794 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 USP20Q9Y2K6 914 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 MAP2P11137 1827 aaKnown RBP5.34□□□□□ -1.56
HERC1-201ENST00000443617 FOXO6A8MYZ6 492 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 PSMG1O95456 288 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 ASLP04424 464 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 VCLP18206 1134 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 CNGA3Q16281 694 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 BORCS6Q96GS4 357 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 RILPQ96NA2 401 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 PSTPIP2Q9H939 334 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 DDX18Q9NVP1 670 aaKnown RBP5.34□□□□□ -1.56
HERC1-201ENST00000443617 TMOD2Q9NZR1 351 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 A8MXQ7 604 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 GALK1P51570 392 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 DNAAF5Q86Y56 855 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 C4orf33Q8N1A6 199 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 CYTH2Q99418 400 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 INTS2Q9H0H0 1204 aaKnown RBP5.34□□□□□ -1.56
HERC1-201ENST00000443617 BARHL2Q9NY43 387 aa5.34□□□□□ -1.56
HERC1-201ENST00000443617 PTGIRP43119 386 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 USP46P62068 366 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 R3HDM1Q15032 1099 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 GSTA3Q16772 222 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 LRRC36Q1X8D7 754 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 COBLL1Q53SF7 1204 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 C11orf63Q6NUN7 778 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 LRRC6Q86X45 466 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 SYNE4Q8N205 404 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 PPP1R14BQ96C90 147 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 RBM15Q96T37 977 aaKnown RBP eCLIP5.33□□□□□ -1.562e-6■■■■□ 19.9
HERC1-201ENST00000443617 OSBPL8Q9BZF1 889 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 UNC45AQ9H3U1 944 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 HEY2Q9UBP5 337 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ACVR2BQ13705 512 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 RBM46Q8TBY0 533 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 DDI1Q8WTU0 396 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 FAM161BQ96MY7 647 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 RANBP17Q9H2T7 1088 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 GRHL1Q9NZI5 618 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 STK24Q9Y6E0 443 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 GOLGA4Q13439 2230 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 ARHGAP44Q17R89 818 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 STXBP4Q6ZWJ1 553 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ANO5Q75V66 913 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 EXOC3L1Q86VI1 746 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CLIC5Q9NZA1 410 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 STXBP5LQ9Y2K9 1186 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 KLRF2D3W0D1 207 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CCDC166P0CW27 439 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CBX3Q13185 183 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ZNF554Q86TJ5 538 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 OGFOD1Q8N543 542 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 TSPYL2Q9H2G4 693 aaPredicted RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 ARL8BQ9NVJ2 186 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms