RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SRGAP2BP0DMP2 458 aa23.19■■□□□ 1.3
CDKN3-204ENST00000442975 PLCG1P19174 1290 aa23.19■■□□□ 1.3
CDKN3-204ENST00000442975 MARCKSP29966 332 aaPredicted RBP23.19■■□□□ 1.3
CDKN3-204ENST00000442975 SLC12A3P55017 1021 aa23.19■■□□□ 1.3
CDKN3-204ENST00000442975 CACNB1Q02641 598 aaPredicted RBP23.19■■□□□ 1.3
CDKN3-204ENST00000442975 MAPK7Q13164 816 aa23.19■■□□□ 1.3
CDKN3-204ENST00000442975 SMAD4Q13485 552 aaKnown RBP23.19■■□□□ 1.3
CDKN3-204ENST00000442975 DHX8Q14562 1220 aaKnown RBP23.19■■□□□ 1.3
CDKN3-204ENST00000442975 KARSQ15046 597 aaKnown RBP23.19■■□□□ 1.3
CDKN3-204ENST00000442975 ATF7IP2Q5U623 682 aa23.19■■□□□ 1.3
CDKN3-204ENST00000442975 EEF1DP3Q658K8 133 aa23.19■■□□□ 1.3
CDKN3-204ENST00000442975 ZBP1Q9H171 429 aa23.19■■□□□ 1.3
CDKN3-204ENST00000442975 CLEC1BQ9P126 229 aa23.19■■□□□ 1.3
CDKN3-204ENST00000442975 NPHP3-ACAD11A0A0J9YXS1 232 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 C2orf71A6NGG8 1288 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 NRP1O14786 923 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 ALDH2P05091 517 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 SSTR3P32745 418 aaPredicted RBP23.18■■□□□ 1.3
CDKN3-204ENST00000442975 DCAF4L1Q3SXM0 396 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 NT5DC1Q5TFE4 455 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 DDX53Q86TM3 631 aaKnown RBP23.18■■□□□ 1.3
CDKN3-204ENST00000442975 KCTD17Q8N5Z5 321 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 MRPL43Q8N983 215 aaKnown RBP23.18■■□□□ 1.3
CDKN3-204ENST00000442975 SYT2Q8N9I0 419 aaPredicted RBP23.18■■□□□ 1.3
CDKN3-204ENST00000442975 MIOSQ9NXC5 875 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 SNTG2Q9NY99 539 aa23.18■■□□□ 1.3
CDKN3-204ENST00000442975 SLC16A4O15374 487 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 SLC26A4O43511 780 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 NR1I2O75469 434 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 RECQL4O94761 1208 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 CXCL14O95715 111 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 GRIK3Q13003 919 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 GPBP1Q86WP2 473 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 COLGALT2Q8IYK4 626 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 MSLNLQ96KJ4 702 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 VN1R3Q9BXE9 311 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 C17orf75Q9HAS0 396 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 ARHGAP28Q9P2N2 729 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 GDAQ9Y2T3 454 aa23.17■■□□□ 1.3
CDKN3-204ENST00000442975 MBTPS2O43462 519 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 PLS3P13797 630 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 DSC1Q08554 894 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 PTPAQ15257 358 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 ZNF568Q3ZCX4 644 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 SPECC1Q5M775 1068 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 APBB1IPQ7Z5R6 666 aaPredicted RBP23.16■■□□□ 1.3
CDKN3-204ENST00000442975 FAM178BQ8IXR5 827 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 LRRC15Q8TF66 581 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 MRPL4Q9BYD3 311 aaKnown RBP23.16■■□□□ 1.3
CDKN3-204ENST00000442975 MARCH5Q9NX47 278 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 KCND2Q9NZV8 630 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 BDP1A6H8Y1 2624 aa23.16■■□□□ 1.3
CDKN3-204ENST00000442975 TCF20Q9UGU0 1960 aaKnown RBP23.16■■□□□ 1.3
CDKN3-204ENST00000442975 ZMYM2Q9UBW7 1377 aa23.15■■□□□ 1.3
CDKN3-204ENST00000442975 F8W810 466 aa23.15■■□□□ 1.3
CDKN3-204ENST00000442975 KRT18P05783 430 aaKnown RBP23.15■■□□□ 1.3
CDKN3-204ENST00000442975 CTSAP10619 480 aa23.15■■□□□ 1.3
CDKN3-204ENST00000442975 FOXD4L5Q5VV16 416 aaPredicted RBP23.15■■□□□ 1.3
CDKN3-204ENST00000442975 SMRP1Q8NCR6 262 aa23.15■■□□□ 1.3
CDKN3-204ENST00000442975 GSTCDQ8NEC7 633 aa23.15■■□□□ 1.3
CDKN3-204ENST00000442975 FOXD4L4Q8WXT5 416 aaPredicted RBP23.15■■□□□ 1.3
CDKN3-204ENST00000442975 USP28Q96RU2 1077 aa23.15■■□□□ 1.3
CDKN3-204ENST00000442975 ZSCAN16Q9H4T2 348 aaPredicted RBP23.15■■□□□ 1.3
CDKN3-204ENST00000442975 FBXO2Q9UK22 296 aaPredicted RBP23.15■■□□□ 1.3
CDKN3-204ENST00000442975 RBM19Q9Y4C8 960 aaKnown RBP23.15■■□□□ 1.3
CDKN3-204ENST00000442975 CLASP2O75122 1294 aaKnown RBP23.14■■□□□ 1.29
CDKN3-204ENST00000442975 HARSP12081 509 aaKnown RBP23.14■■□□□ 1.29
CDKN3-204ENST00000442975 TXLNAP40222 546 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 SMTNP53814 917 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 COASYQ13057 564 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 MCM6Q14566 821 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 PTPN14Q15678 1187 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 SMAD2Q15796 467 aaKnown RBP23.14■■□□□ 1.29
CDKN3-204ENST00000442975 TAS1R3Q7RTX0 852 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 GJD3Q8N144 294 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 RABGGTAQ92696 567 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 RAD54LQ92698 747 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 EPSTI1Q96J88 318 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 CLIC6Q96NY7 704 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 REEP2Q9BRK0 252 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 TARS2Q9BW92 718 aaKnown RBP23.14■■□□□ 1.29
CDKN3-204ENST00000442975 APOL5Q9BWW9 433 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 TMEM134Q9H6X4 195 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 CACNG4Q9UBN1 327 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 STK39Q9UEW8 545 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 TNFSF13BQ9Y275 285 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 HCFC2Q9Y5Z7 792 aa23.14■■□□□ 1.29
CDKN3-204ENST00000442975 CASTOR2A6NHX0 329 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 C2CD2LO14523 706 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 URODP06132 367 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 ZP2Q05996 745 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 STRN3Q13033 797 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 ARSHQ5FYA8 562 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 USP49Q70CQ1 688 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 ZBTB33Q86T24 672 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 SPRYD3Q8NCJ5 442 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 SPIRE2Q8WWL2 714 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 CASP10Q92851 521 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 ACO2Q99798 780 aaKnown RBP23.13■■□□□ 1.29
CDKN3-204ENST00000442975 TCHPQ9BT92 498 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms