RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 TMEM62Q0P6H9 643 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 MORF4L2Q15014 288 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 GARNL3Q5VVW2 1013 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 DPY19L2Q6NUT2 758 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 C1orf94Q6P1W5 598 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 CCNI2Q6ZMN8 369 aaPredicted RBP5.92□□□□□ -1.46
PTPRC-209ENST00000442510 RBM44Q6ZP01 1051 aaKnown RBP5.92□□□□□ -1.46
PTPRC-209ENST00000442510 LRRC74BQ6ZQY2 392 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 NOSTRINQ8IVI9 506 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 HIPK4Q8NE63 616 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 SLC26A7Q8TE54 656 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 GRK7Q8WTQ7 553 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 PYROXD1Q8WU10 500 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 YME1L1Q96TA2 773 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 HMG20AQ9NP66 347 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 GINM1Q9NU53 330 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 FAM105AQ9NUU6 356 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 ZNF224Q9NZL3 707 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 SLC12A6Q9UHW9 1150 aa5.92□□□□□ -1.46
PTPRC-209ENST00000442510 SGK1O00141 431 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 PEX1O43933 1283 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 KATNA1O75449 491 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 OR5F1O95221 314 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 GYS1P13807 737 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 GARTP22102 1010 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CTDSPL2Q05D32 466 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 LGALS3BPQ08380 585 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 SSX2Q16385 188 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 PLA2G4EQ3MJ16 856 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ARMCX4Q5H9R4 360 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ATL3Q6DD88 541 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ATG14Q6ZNE5 492 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 SETD3Q86TU7 594 aaPredicted RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 SIX6OS1Q8N1H7 587 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 VANGL1Q8TAA9 524 aaPredicted RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 PRCCQ92733 491 aaPredicted RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ARL5BQ96KC2 179 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ART5Q96L15 291 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 BEGAINQ9BUH8 593 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 RTFDC1Q9BY42 306 aaPredicted RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CYP39A1Q9NYL5 469 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 MALT1Q9UDY8 824 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ARHGAP26Q9UNA1 814 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ABCC9O60706 1549 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 LRRC10BA6NIK2 292 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 M0QX08 132 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 BMP10O95393 424 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 IL33O95760 270 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 GUCA1CO95843 209 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CAPZA2P47755 286 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 PTDSS1P48651 473 aaKnown RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 KPNA1P52294 538 aaPredicted RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 TRAP1Q12931 704 aaKnown RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 RESTQ13127 1097 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 MAPK6Q16659 721 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 SLC10A5Q5PT55 438 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ARMC4Q5T2S8 1044 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ATG16L1Q676U5 607 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 APOA5Q6Q788 366 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 KRT28Q7Z3Y7 464 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 DIS3L2Q8IYB7 885 aaKnown RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ANKRD35Q8N283 1001 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 SLC17A8Q8NDX2 589 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 FBXO30Q8TB52 745 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 BCL7CQ8WUZ0 217 aaPredicted RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 FERMT2Q96AC1 680 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 S100PBPQ96BU1 408 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 PNKPQ96T60 521 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 NOC4LQ9BVI4 516 aaKnown RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CLEC4MQ9H2X3 399 aaPredicted RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 MMRN2Q9H8L6 949 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 PANK4Q9NVE7 773 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 TMEM221A6NGB7 291 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 M0R3G1 203 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 HAT1O14929 419 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CLASP2O75122 1294 aaKnown RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 UBOX5O94941 541 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 TRIM49P0CI25 452 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 TRIM49CP0CI26 452 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CLK3P49761 638 aaKnown RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 TPTEP56180 551 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ODR4Q5SWX8 454 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CATSPER4Q7RTX7 472 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 TICAM1Q8IUC6 712 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 LILRB1Q8NHL6 650 aaPredicted RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CALN1Q9BXU9 219 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 EHD4Q9H223 541 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CUEDC2Q9H467 287 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 CYP4F12Q9HCS2 524 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 NDFIP2Q9NV92 336 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 RNF14Q9UBS8 474 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 RSL24D1Q9UHA3 163 aaKnown RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 DMTF1Q9Y222 760 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 FAM32AQ9Y421 112 aaKnown RBP5.91□□□□□ -1.46
PTPRC-209ENST00000442510 VWA3AA6NCI4 1184 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 KCNQ3O43525 872 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 NR1I2O75469 434 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 TNFAIP8O95379 198 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 ARFIP2P53365 341 aa5.91□□□□□ -1.46
PTPRC-209ENST00000442510 HSD17B7P56937 341 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms