RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TATDN2Q93075 761 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 SEC16BQ96JE7 1060 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 TXLNGYQ9BZA5 131 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 MTFR1LQ9H019 292 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 PABPC3Q9H361 631 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 TCEAL9Q9UHQ7 104 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 NOCTQ9UK39 431 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 RPTORQ8N122 1335 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 PHF2O75151 1096 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 RTN2O75298 545 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 TRAF1Q13077 416 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 SEL1L2Q5TEA6 688 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 AGBL2Q5U5Z8 902 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 CCDC121Q6ZUS5 278 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 OTUD6AQ7L8S5 288 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 CCDC13Q8IYE1 715 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 ATG4AQ8WYN0 398 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 OSBPL7Q9BZF2 842 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 AGO4Q9HCK5 861 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 UBE4BO95155 1302 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 CNTNAP1P78357 1384 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 VPS41P49754 854 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 FMO1Q01740 532 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 C7orf43Q8WVR3 580 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 CLEC4DQ8WXI8 215 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 ASTN2O75129 1339 aaPredicted RBP14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 SYNGAP1Q96PV0 1343 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 DNM1LO00429 736 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 CYP11B1P15538 503 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 CNGA1P29973 690 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 TNIP1Q15025 636 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 LARGE2Q8N3Y3 721 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 KCTD17Q8N5Z5 321 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 RASAL2Q9UJF2 1139 aa14.56□□□□□ -0.08
HERPUD1-204ENST00000439977 RGS16O15492 202 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 ACSL3O95573 720 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 RPS6P62753 249 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 DHX34Q14147 1143 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 RSBN1LQ6PCB5 846 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 FAM71AQ8IYT1 594 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 PWWP2AQ96N64 755 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 MLXIPLQ9NP71 852 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 FEM1BQ9UK73 627 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 DIS3Q9Y2L1 958 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 SLX4Q8IY92 1834 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 DENND3A2RUS2 1198 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 CCNE2O96020 404 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 ICAM1P05362 532 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 HSD17B4P51659 736 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 PPP1R7Q15435 360 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 STYK1Q6J9G0 422 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 C6orf89Q6UWU4 347 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 MGARPQ8TDB4 240 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 CNKSR1Q969H4 720 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 CCDC114Q96M63 670 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 DDX23Q9BUQ8 820 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 COL11A2P13942 1736 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 FAM187AA6NFU0 413 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 CHRNA3P32297 505 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 BYSLQ13895 437 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 LRRC14Q15048 493 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 C11orf63Q6NUN7 778 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 FAM160B2Q86V87 743 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 SLC13A5Q86YT5 568 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 CACNA2D3Q8IZS8 1091 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 PRPF38AQ8NAV1 312 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 SYTL5Q8TDW5 730 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 CPA5Q8WXQ8 436 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 GGT7Q9UJ14 662 aa14.55□□□□□ -0.08
HERPUD1-204ENST00000439977 MIF4GDA9UHW6 222 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 COILP38432 576 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 NPTX2P47972 431 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 GTF2BQ00403 316 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 ADCY1Q08828 1119 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 LONRF1Q17RB8 773 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 HOOK3Q86VS8 718 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 BSNDQ8WZ55 320 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 POMGNT1Q8WZA1 660 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 TLCD1Q96CP7 247 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 XPO6Q96QU8 1125 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 PRMT1Q99873 361 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 HEMGNQ9BXL5 484 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 PDGFDQ9GZP0 370 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 MYH11P35749 1972 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 ATP8B3O60423 1300 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 FSBPO95073 299 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 CREB1P16220 341 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 GJC1P36383 396 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 PTGER2P43116 358 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 GKAP1Q5VSY0 366 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 PARD3BQ8TEW8 1205 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 TBX20Q9UMR3 447 aa14.54□□□□□ -0.08
HERPUD1-204ENST00000439977 MUTP22033 750 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 CTNNA2P26232 953 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 MFAP3P55082 362 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 EIF3BP55884 814 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 ACTN3Q08043 901 aaPredicted RBP14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 RNF207Q6ZRF8 634 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 SPATS2Q86XZ4 545 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms