RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	NOTUM	Q6P988	496 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	NEK8	Q86SG6	692 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	PALB2	Q86YC2	1186 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	TCP11	Q8WWU5	503 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	CCDC51	Q96ER9	411 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	DYDC2	Q96IM9	177 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	PHF20	Q9BVI0	1012 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	CSRNP2	Q9H175	543 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	SLK	Q9H2G2	1235 aa	Predicted RBP	18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	NXF3	Q9H4D5	531 aa	Known RBP	18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	PLEKHA4	Q9H4M7	779 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	DPP7	Q9UHL4	492 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976		R4GN57	208 aa		18.09	■□□□□ 0.49
LAMB1-205	ENST00000439976	GPR179	Q6PRD1	2367 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	TBX3	O15119	743 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	ERLIN2	O94905	339 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	LMNA	P02545	664 aa	Known RBP	18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	GCFC2	P16383	781 aa	Known RBP	18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	ARF4	P18085	180 aa	Predicted RBP	18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	MBTD1	Q05BQ5	628 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	CTTN	Q14247	550 aa	Known RBP	18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	XKR9	Q5GH70	373 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	PHLDB3	Q6NSJ2	640 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	FUT10	Q6P4F1	479 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	GPR65	Q8IYL9	337 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	ST13P5	Q8NFI4	369 aa	Predicted RBP	18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	RIN2	Q8WYP3	895 aa	Predicted RBP	18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	RMDN1	Q96DB5	314 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	MTR	Q99707	1265 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	PRKD2	Q9BZL6	878 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	SEMA4A	Q9H3S1	761 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	GJB4	Q9NTQ9	266 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	ZDHHC7	Q9NXF8	308 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	FNIP2	Q9P278	1114 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	GIT1	Q9Y2X7	761 aa		18.08	■□□□□ 0.48
LAMB1-205	ENST00000439976	CEP250	Q9BV73	2442 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	COL4A3	Q01955	1670 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	STK25	O00506	426 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	CPLX1	O14810	134 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	SLITRK3	O94933	977 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	DCN	P07585	359 aa	Known RBP	18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	GLUL	P15104	373 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	RPL17	P18621	184 aa	Known RBP	18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	CYP4A11	Q02928	519 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	POU5F1B	Q06416	359 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	CAPS	Q13938	189 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	EARS2	Q5JPH6	523 aa	Known RBP	18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	ELMSAN1	Q6PJG2	1045 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	OTUD6A	Q7L8S5	288 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	POTED	Q86YR6	584 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	OXER1	Q8TDS5	423 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	ASAP3	Q8TDY4	903 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	RABGGTA	Q92696	567 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	RPP25	Q9BUL9	199 aa	Known RBP	18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	COLEC11	Q9BWP8	271 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	APOL6	Q9BWW8	343 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	ZSWIM4	Q9H7M6	989 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	ARHGEF3	Q9NR81	526 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	SLC2A4RG	Q9NR83	387 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	NUMBL	Q9Y6R0	609 aa		18.07	■□□□□ 0.48
LAMB1-205	ENST00000439976	CCDC194	A0A1B0GVG4	234 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	INO80B-WBP1	J3KQ70	363 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	B4GALT5	O43286	388 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	CCNT1	O60563	726 aa	Known RBP	18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	AKAP5	P24588	427 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	ARL2	P36404	184 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	STK3	Q13188	491 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	MXD4	Q14582	209 aa	Predicted RBP	18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	USP41	Q3LFD5	358 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	SPECC1	Q5M775	1068 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	NCAPH2	Q6IBW4	605 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	GET4	Q7L5D6	327 aa	Predicted RBP	18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	GLYCTK	Q8IVS8	523 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	CACNG4	Q9UBN1	327 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	ADAM28	Q9UKQ2	775 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	MYH15	Q9Y2K3	1946 aa		18.06	■□□□□ 0.48
LAMB1-205	ENST00000439976	FAM205C	A6NFA0	338 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	POTEM	A6NI47	508 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	DTNB	O60941	627 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	ZMYND10	O75800	440 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	SP9	P0CG40	484 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	RTP2	Q5QGT7	225 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	PIK3AP1	Q6ZUJ8	805 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	CDR2L	Q86X02	465 aa	Predicted RBP	18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	MAML2	Q8IZL2	1156 aa	Predicted RBP	18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	KCNG4	Q8TDN1	519 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	PAAF1	Q9BRP4	392 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	NFKBIZ	Q9BYH8	718 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	PIDD1	Q9HB75	910 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	SIT1	Q9Y3P8	196 aa		18.05	■□□□□ 0.48
LAMB1-205	ENST00000439976	LRRN2	O75325	713 aa		18.04	■□□□□ 0.48
LAMB1-205	ENST00000439976	REC8	O95072	547 aa		18.04	■□□□□ 0.48
LAMB1-205	ENST00000439976	LYPLA2	O95372	231 aa		18.04	■□□□□ 0.48
LAMB1-205	ENST00000439976	GLRA2	P23416	452 aa		18.04	■□□□□ 0.48
LAMB1-205	ENST00000439976	SCRN1	Q12765	414 aa		18.04	■□□□□ 0.48
LAMB1-205	ENST00000439976	GRIK3	Q13003	919 aa		18.04	■□□□□ 0.48
LAMB1-205	ENST00000439976	DCLRE1A	Q6PJP8	1040 aa		18.04	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms