RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SPOPLQ6IQ16 392 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 DHX38Q92620 1227 aaKnown RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 CPB2Q96IY4 423 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 EPC1Q9H2F5 836 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 GOLPH3Q9H4A6 298 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 CHORDC1Q9UHD1 332 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 ZNFX1Q9P2E3 1918 aaKnown RBP16.3■□□□□ 0.2
CPSF7-205ENST00000439958 UNCXA6NJT0 531 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 AOC2O75106 756 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 RNASE9P60153 205 aaKnown RBP16.3■□□□□ 0.2
CPSF7-205ENST00000439958 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
CPSF7-205ENST00000439958 TFDP1Q14186 410 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 TARBP2Q15633 366 aaKnown RBP16.3■□□□□ 0.2
CPSF7-205ENST00000439958 HGSNATQ68CP4 663 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 PLPPR4Q7Z2D5 763 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 TLK2Q86UE8 772 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 AFAP1L1Q8TED9 768 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 UBXN4Q92575 508 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 SIX2Q9NPC8 291 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 PSMC4P43686 418 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 ALKBH5Q6P6C2 394 aaKnown RBP16.3■□□□□ 0.2
CPSF7-205ENST00000439958 EHBP1Q8NDI1 1231 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 PLCB1Q9NQ66 1216 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 LCTP09848 1927 aa16.3■□□□□ 0.2
CPSF7-205ENST00000439958 TNFAIP3P21580 790 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 EPC2Q52LR7 807 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 VTI1AQ96AJ9 217 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 AP5M1Q9H0R1 490 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 ST6GALNAC4Q9H4F1 302 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 RNF19AQ9NV58 838 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 F8VZ95 297 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 N4BP1O75113 896 aaKnown RBP16.29■□□□□ 0.2
CPSF7-205ENST00000439958 SOX5P35711 763 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 DUSP28Q4G0W2 176 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 FBXL13Q8NEE6 735 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 PPTC7Q8NI37 304 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 JPH2Q9BR39 696 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-205ENST00000439958 MINDY3Q9H8M7 445 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 CGNQ9P2M7 1197 aaKnown RBP16.29■□□□□ 0.2
CPSF7-205ENST00000439958 KCNG1Q9UIX4 513 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 CAPN6Q9Y6Q1 641 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 LOC285556D6RIA3 1793 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 CYP26A1O43174 497 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 PPFIA4O75335 1185 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 TACC1O75410 805 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 WNT7BP56706 349 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 ABRAQ8N0Z2 381 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 HINFPQ9BQA5 517 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 APOL6Q9BWW8 343 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 EDEM3Q9BZQ6 932 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 MAF1Q9H063 256 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 C1orf112Q9NSG2 853 aa16.29■□□□□ 0.2
CPSF7-205ENST00000439958 NCK2O43639 380 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 EXTL3O43909 919 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 ERLIN2O94905 339 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 SREBF2Q12772 1141 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 GRIK4Q16099 956 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 SCARA5Q6ZMJ2 495 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 PHLDB2Q86SQ0 1253 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 TATDN2Q93075 761 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 HVCN1Q96D96 273 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 ALS2CR12Q96Q35 445 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 KCND1Q9NSA2 647 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 RAB20Q9NX57 234 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 EVPLQ92817 2033 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 ZBTB42B2RXF5 422 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 FTCDO95954 541 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 ATP1A1P05023 1023 aaKnown RBP16.28■□□□□ 0.2
CPSF7-205ENST00000439958 MMP3P08254 477 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 FECHP22830 423 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 ZNF394Q53GI3 561 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 SLFN12LQ6IEE8 588 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
CPSF7-205ENST00000439958 FERP16591 822 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 EFNA5P52803 228 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 SLC18A3Q16572 532 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 SLC20A1Q8WUM9 679 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 HAPLN2Q9GZV7 340 aa16.28■□□□□ 0.2
CPSF7-205ENST00000439958 LGR5O75473 907 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 CD58P19256 250 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 GARTP22102 1010 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 RGS2P41220 211 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 SLC26A2P50443 739 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 RTP1P59025 263 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 C1orf220Q5T0J3 134 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 ATF7IP2Q5U623 682 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 EEF1DP3Q658K8 133 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 CCDC102AQ96A19 550 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 STK33Q9BYT3 514 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 DYNC1I1O14576 645 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 PGK1P00558 417 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 SLC10A3P09131 477 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 DPH6Q7L8W6 267 aa16.27■□□□□ 0.2
CPSF7-205ENST00000439958 IRF2BP2Q7Z5L9 587 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms