RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 TBC1D7Q9P0N9 293 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 GABBR1Q9UBS5 961 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 DDX41Q9UJV9 622 aaKnown RBP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM184BQ9ULE4 1060 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 EXOC7Q9UPT5 735 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 TRAF3IP3Q9Y228 551 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 USP20Q9Y2K6 914 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 PCDHGC4Q9Y5F7 938 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF236Q9UL36 1845 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ASTN1O14525 1302 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 ITIH6Q6UXX5 1313 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 SYNGAP1Q96PV0 1343 aa4.36□□□□□ -1.71
HMGB1P37-201ENST00000439613 DOCK3Q8IZD9 2030 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 GSTTP1A0A1W2PQM5 241 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TRIM49BA6NDI0 452 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 AKR1B15C9JRZ8 316 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PES1O00541 588 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 NKRFO15226 690 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC16A3O15427 465 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCP110O43303 1012 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 GAS2O43903 313 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 BNIP3LO60238 219 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF500O60304 480 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TLR2O60603 784 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PEX10O60683 326 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 COBLO75128 1261 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 HIP1RO75146 1068 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PPFIA4O75335 1185 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TOMM70O94826 608 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 FARP2O94887 1054 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 STBD1O95210 358 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 GH1P01241 217 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 NR3C1P04150 777 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 HOXC6P09630 235 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TXNP10599 105 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 EPB41P11171 864 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 UBA1P22314 1058 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 BRD2P25440 801 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PSMC2P35998 433 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PBX1P40424 430 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 KCNJ6P48051 423 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TM4SF4P48230 202 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 STAT5BP51692 787 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PMS1P54277 932 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 MARSP56192 900 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 SP2Q02086 613 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PRKCEQ02156 737 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TBC1D8BQ0IIM8 1120 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 FSTL1Q12841 308 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 MAPK7Q13164 816 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 DMP1Q13316 513 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ADAM9Q13443 819 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 GRB14Q14449 540 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PPP2R5AQ15172 486 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 MAN2A1Q16706 1144 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 UGCGQ16739 394 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCDC40Q4G0X9 1142 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 VWA3BQ502W6 1294 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 HSP90AA4PQ58FG1 418 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM102BQ5T8I3 360 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 SAMD5Q5TGI4 173 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 IQSEC1Q6DN90 963 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCDC62Q6P9F0 684 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 LRRC55Q6ZSA7 311 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ANO5Q75V66 913 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ARMCX2Q7L311 632 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PLPPR4Q7Z2D5 763 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 GPR142Q7Z601 462 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 FRMD5Q7Z6J6 570 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 CREBRFQ8IUR6 639 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 CNGA4Q8IV77 575 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 GLYCTKQ8IVS8 523 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 LRRC8AQ8IWT6 810 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZC3H3Q8IXZ2 948 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 CACTINQ8WUQ7 758 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TCP11Q8WWU5 503 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC7A3Q8WY07 619 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 GLG1Q92896 1179 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 IFT43Q96FT9 208 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 FGD4Q96M96 766 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 SPATA33Q96N06 139 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ACCSQ96QU6 501 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PANX2Q96RD6 677 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ERGIC2Q96RQ1 377 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 NTPCRQ9BSD7 190 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TINF2Q9BSI4 451 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 NOC4LQ9BVI4 516 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 STRA6Q9BX79 667 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 NAA15Q9BXJ9 866 aaKnown RBP4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 EDEM3Q9BZQ6 932 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 GBP3Q9H0R5 595 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 VPS16Q9H269 839 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 KCTD10Q9H3F6 313 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 SMARCAD1Q9H4L7 1026 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 ATP6V0A4Q9HBG4 840 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 PDLIM7Q9NR12 457 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 CYP26B1Q9NR63 512 aa4.35□□□□□ -1.71
HMGB1P37-201ENST00000439613 TAB2Q9NYJ8 693 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms