RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GSTA5Q7RTV2 222 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 HIPK4Q8NE63 616 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 TPCN2Q8NHX9 752 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 FAM20AQ96MK3 541 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 NACC1Q96RE7 527 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 TCHPQ9BT92 498 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 DLGAP2Q9P1A6 1054 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 KAT6AQ92794 2004 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ENTPD5O75356 428 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 KRT15P19012 456 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 PRELPP51888 382 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 MTMR3Q13615 1198 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 APBB1IPQ7Z5R6 666 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 JAMLQ86YT9 394 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 IL31RAQ8NI17 732 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ETNPPLQ8TBG4 499 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 SLC35C1Q96A29 364 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 RMDN2Q96LZ7 410 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 TGS1Q96RS0 853 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 FAM129AQ9BZQ8 928 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 METTL14Q9HCE5 456 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 SLCO1B3Q9NPD5 702 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 MTRF1LQ9UGC7 380 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 IGKV6D-41A0A0C4DH26 115 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 THAP12O43422 761 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 FTLP02792 175 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZCCHC18P0CG32 403 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 GNAT1P11488 350 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 NQO1P15559 274 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZBTB16Q05516 673 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 MTMR2Q13614 643 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 CUL1Q13616 776 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ANKRD20A2Q5SQ80 823 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ANKRD20A1Q5TYW2 823 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ANKRD20A3Q5VUR7 823 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZC3H18Q86VM9 953 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 TTC8Q8TAM2 541 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 INTS2Q9H0H0 1204 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 EHMT1Q9H9B1 1298 aa10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 LARSQ9P2J5 1176 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 WRAP73Q9P2S5 460 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-202ENST00000439374 PAPPAQ13219 1627 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 SPDYE5A6NIY4 337 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 DDX3XO00571 662 aaKnown RBP eCLIP10.63□□□□□ -0.712e-8■■□□□ 12.9
CDC42SE1-202ENST00000439374 PPP1R12AO14974 1030 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CYP26A1O43174 497 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 PEX10O60683 326 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 IFNB1P01574 187 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 UBTFL6P0CB48 400 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 FMO5P49326 533 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 SPP2Q13103 211 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CRYMQ14894 314 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 SGSM1Q2NKQ1 1148 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 LLGL2Q6P1M3 1020 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 PASD1Q8IV76 773 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ALG3Q92685 438 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CNKSR1Q969H4 720 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 TOPORSQ9NS56 1045 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZNF70Q9UC06 446 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ABCA3Q99758 1704 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CCDC160A6NGH7 325 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 PDXKO00764 312 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 SUN1O94901 812 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 BAG2O95816 211 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CHRM1P11229 460 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ATP2A2P16615 1042 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ECHS1P30084 290 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 HOXD13P35453 343 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 SREBF1P36956 1147 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 PLCB3Q01970 1234 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZCWPW2Q504Y3 356 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ARHGEF16Q5VV41 709 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 C6orf89Q6UWU4 347 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 C15orf52Q6ZUT6 534 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 RNF10Q8N5U6 811 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 AKT1S1Q96B36 256 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 NUDCD1Q96RS6 583 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 TSC22D3Q99576 134 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 KCNH7Q9NS40 1196 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 KLHL14Q9P2G3 628 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 NKX1-2Q9UD57 310 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 A0A1B0GVG6 124 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 A6NNZ2 444 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CLDN3O15551 220 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CALRP27797 417 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ADCY8P40145 1251 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 RPL21P46778 160 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 TUBB8Q3ZCM7 444 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 SEZ6Q53EL9 994 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 CCDC137Q6PK04 289 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 OTOP1Q7RTM1 612 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 RPUSD2Q8IZ73 545 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 SCYL3Q8IZE3 742 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 POMGNT1Q8WZA1 660 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ATP6V0A4Q9HBG4 840 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 PICK1Q9NRD5 415 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 AGPAT3Q9NRZ7 376 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms