RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 VAMP7P51809 220 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 CDR1P51861 262 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 GPC5P78333 572 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 PPARDQ03181 441 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 PPP3CAQ08209 521 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 AADACL2Q6P093 401 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 CCDC121Q6ZUS5 278 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 RPUSD2Q8IZ73 545 aaKnown RBP17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 ZKSCAN4Q969J2 545 aaPredicted RBP17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 C18orf8Q96DM3 657 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 PGM2Q96G03 612 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 RIT2Q99578 217 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 SNX24Q9Y343 169 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 PPP2R3BQ9Y5P8 575 aa17.65■□□□□ 0.42
CLCNKA-203ENST00000439316 FAM170AA1A519 330 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 IPO5O00410 1097 aaKnown RBP17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 ALAS1P13196 640 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 DRD4P21917 467 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 PLTPP55058 493 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 CETN1Q12798 172 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 C1orf220Q5T0J3 134 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 ERMARDQ5T6L9 678 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 DENND2CQ68D51 928 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 PADI6Q6TGC4 694 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 DLK2Q6UY11 383 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 FBXO25Q8TCJ0 367 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 RNF25Q96BH1 459 aaPredicted RBP17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 XPO6Q96QU8 1125 aaKnown RBP17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 FAM129AQ9BZQ8 928 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 TMEM206Q9H813 350 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 GINM1Q9NU53 330 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 ZNF112Q9UJU3 913 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 PNMA2Q9UL42 364 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 USP20Q9Y2K6 914 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 RPTORQ8N122 1335 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 RTN2O75298 545 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 PEX5P50542 639 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 SMTNP53814 917 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 TTC27Q6P3X3 843 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 CACNA2D3Q8IZS8 1091 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 MORC4Q8TE76 937 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 OSBPL7Q9BZF2 842 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 PCDHA3Q9Y5H8 950 aa17.64■□□□□ 0.41
CLCNKA-203ENST00000439316 SSC5DA1L4H1 1573 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 TISP43B9A030 160 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 PODXLO00592 558 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 RPL21P46778 160 aaKnown RBP17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 ZDHHC14Q8IZN3 488 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 CHURC1Q8WUH1 139 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 CD101Q93033 1021 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 ACCSQ96QU6 501 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 PCDHB18PQ96TA0 734 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 MXRA8Q9BRK3 442 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 PCIF1Q9H4Z3 704 aa17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 NOCTQ9UK39 431 aaKnown RBP17.63■□□□□ 0.41
CLCNKA-203ENST00000439316 CCDC169A6NNP5 214 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 BACH1O14867 736 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 MAPK13O15264 365 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 PMM2O15305 246 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 RASSF9O75901 435 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 CHRNB2P17787 502 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 COMTP21964 271 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 MMP13P45452 471 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 GCLMP48507 274 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 DGKZQ13574 1117 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 PRKG1Q13976 671 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 CYP1B1Q16678 543 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 SUPT20HL1Q3ZLR7 823 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 ANKRD20A8PQ5CZ79 823 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 SEL1L2Q5TEA6 688 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 SCYL3Q8IZE3 742 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 MDM1Q8TC05 714 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 EPS8L1Q8TE68 723 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 DCPSQ96C86 337 aaKnown RBP17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 CHMP6Q96FZ7 201 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 CBWD1Q9BRT8 395 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 TMEM109Q9BVC6 243 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 WNT8AQ9H1J5 351 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 LARSQ9P2J5 1176 aaKnown RBP17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 PARP2Q9UGN5 583 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 TMEM110-MUSTN1A8MSY1 372 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 PLA2G6O60733 806 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 GZMAP12544 262 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 LACTB2Q53H82 288 aaPredicted RBP17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 GKAP1Q5VSY0 366 aaPredicted RBP17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 ZNF746Q6NUN9 644 aaPredicted RBP17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 PLEKHO2Q8TD55 490 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 IPO4Q8TEX9 1081 aaKnown RBP17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 P3H4Q92791 437 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 KLRG1Q96E93 195 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 L3MBTL3Q96JM7 780 aaPredicted RBP17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 KIAA1683Q9H0B3 1180 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 ADAM7Q9H2U9 754 aa17.62■□□□□ 0.41
CLCNKA-203ENST00000439316 ADM5C9JUS6 153 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 GRIN3BO60391 1043 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 ITGB5P18084 799 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 MCCD1P59942 119 aaPredicted RBP17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 SPRED3Q2MJR0 410 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms