RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 DBR1Q9UK59 544 aaKnown RBP16.53■□□□□ 0.24
APP-208ENST00000439274 MRPL11Q9Y3B7 192 aaKnown RBP16.53■□□□□ 0.24
APP-208ENST00000439274 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
APP-208ENST00000439274 CALCAP01258 141 aa16.53■□□□□ 0.24
APP-208ENST00000439274 ALAS1P13196 640 aa16.53■□□□□ 0.24
APP-208ENST00000439274 COILP38432 576 aaPredicted RBP16.53■□□□□ 0.24
APP-208ENST00000439274 MXI1P50539 228 aa16.53■□□□□ 0.24
APP-208ENST00000439274 SLC13A5Q86YT5 568 aaPredicted RBP16.53■□□□□ 0.24
APP-208ENST00000439274 CDAN1Q8IWY9 1227 aa16.53■□□□□ 0.24
APP-208ENST00000439274 LRRC34Q8IZ02 419 aa16.53■□□□□ 0.24
APP-208ENST00000439274 XXYLT1Q8NBI6 393 aa16.53■□□□□ 0.24
APP-208ENST00000439274 ZNF564Q8TBZ8 553 aaPredicted RBP16.53■□□□□ 0.24
APP-208ENST00000439274 SEMA4DQ92854 862 aa16.53■□□□□ 0.24
APP-208ENST00000439274 CENPTQ96BT3 561 aa16.53■□□□□ 0.24
APP-208ENST00000439274 HVCN1Q96D96 273 aa16.53■□□□□ 0.24
APP-208ENST00000439274 ACCSQ96QU6 501 aa16.53■□□□□ 0.24
APP-208ENST00000439274 RPS6KC1Q96S38 1066 aa16.53■□□□□ 0.24
APP-208ENST00000439274 PRMT1Q99873 361 aaKnown RBP16.53■□□□□ 0.24
APP-208ENST00000439274 GLIS2Q9BZE0 524 aaPredicted RBP16.53■□□□□ 0.24
APP-208ENST00000439274 CCDC113Q9H0I3 377 aa16.53■□□□□ 0.24
APP-208ENST00000439274 KCNH7Q9NS40 1196 aa16.53■□□□□ 0.24
APP-208ENST00000439274 COL20A1Q9P218 1284 aa16.53■□□□□ 0.24
APP-208ENST00000439274 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
APP-208ENST00000439274 RIPK2O43353 540 aa16.52■□□□□ 0.24
APP-208ENST00000439274 IFNAR2P48551 515 aa16.52■□□□□ 0.24
APP-208ENST00000439274 FKBP1AP62942 108 aaKnown RBP16.52■□□□□ 0.24
APP-208ENST00000439274 SIX1Q15475 284 aaPredicted RBP16.52■□□□□ 0.24
APP-208ENST00000439274 CLUL1Q15846 466 aa16.52■□□□□ 0.24
APP-208ENST00000439274 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.24
APP-208ENST00000439274 ARMC9Q7Z3E5 817 aa16.52■□□□□ 0.24
APP-208ENST00000439274 CCDC127Q96BQ5 260 aa16.52■□□□□ 0.24
APP-208ENST00000439274 AGBL1Q96MI9 1066 aa16.52■□□□□ 0.24
APP-208ENST00000439274 TMEM206Q9H813 350 aa16.52■□□□□ 0.24
APP-208ENST00000439274 EHMT1Q9H9B1 1298 aa16.52■□□□□ 0.24
APP-208ENST00000439274 MTRF1LQ9UGC7 380 aaKnown RBP16.52■□□□□ 0.24
APP-208ENST00000439274 PODXLO00592 558 aa16.52■□□□□ 0.23
APP-208ENST00000439274 SLC16A4O15374 487 aa16.52■□□□□ 0.23
APP-208ENST00000439274 HSPA6P17066 643 aa16.52■□□□□ 0.23
APP-208ENST00000439274 FMO1Q01740 532 aa16.52■□□□□ 0.23
APP-208ENST00000439274 MYBPC2Q14324 1141 aa16.52■□□□□ 0.23
APP-208ENST00000439274 RASA3Q14644 834 aa16.52■□□□□ 0.23
APP-208ENST00000439274 CBWD2Q8IUF1 395 aa16.52■□□□□ 0.23
APP-208ENST00000439274 FAM71AQ8IYT1 594 aa16.52■□□□□ 0.23
APP-208ENST00000439274 FUKQ8N0W3 1084 aa16.52■□□□□ 0.23
APP-208ENST00000439274 ZNF653Q96CK0 615 aa16.52■□□□□ 0.23
APP-208ENST00000439274 DLATP10515 647 aaKnown RBP16.51■□□□□ 0.23
APP-208ENST00000439274 RARRES1P49788 294 aa16.51■□□□□ 0.23
APP-208ENST00000439274 SPP2Q13103 211 aa16.51■□□□□ 0.23
APP-208ENST00000439274 TCEAL1Q15170 157 aa16.51■□□□□ 0.23
APP-208ENST00000439274 CYB5D1Q6P9G0 228 aa16.51■□□□□ 0.23
APP-208ENST00000439274 HAUS6Q7Z4H7 955 aa16.51■□□□□ 0.23
APP-208ENST00000439274 CCDC197Q8NCU1 140 aa16.51■□□□□ 0.23
APP-208ENST00000439274 ZKSCAN4Q969J2 545 aaPredicted RBP16.51■□□□□ 0.23
APP-208ENST00000439274 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
APP-208ENST00000439274 DDX23Q9BUQ8 820 aaKnown RBP16.51■□□□□ 0.23
APP-208ENST00000439274 WNT8AQ9H1J5 351 aa16.51■□□□□ 0.23
APP-208ENST00000439274 INTS9Q9NV88 658 aaKnown RBP16.51■□□□□ 0.23
APP-208ENST00000439274 CLDN3O15551 220 aa16.51■□□□□ 0.23
APP-208ENST00000439274 PLS3P13797 630 aa16.51■□□□□ 0.23
APP-208ENST00000439274 TRAF1Q13077 416 aa16.51■□□□□ 0.23
APP-208ENST00000439274 LACTB2Q53H82 288 aaPredicted RBP16.51■□□□□ 0.23
APP-208ENST00000439274 C6orf118Q5T5N4 469 aa16.51■□□□□ 0.23
APP-208ENST00000439274 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
APP-208ENST00000439274 C1orf54Q8WWF1 131 aa16.51■□□□□ 0.23
APP-208ENST00000439274 DHX38Q92620 1227 aaKnown RBP16.51■□□□□ 0.23
APP-208ENST00000439274 FAM84AQ96KN4 292 aa16.51■□□□□ 0.23
APP-208ENST00000439274 RIT2Q99578 217 aa16.51■□□□□ 0.23
APP-208ENST00000439274 TOPORSQ9NS56 1045 aaPredicted RBP16.51■□□□□ 0.23
APP-208ENST00000439274 ZNF646O15015 1829 aaPredicted RBP16.5■□□□□ 0.23
APP-208ENST00000439274 DHX15O43143 795 aaKnown RBP16.5■□□□□ 0.23
APP-208ENST00000439274 P4HBP07237 508 aaKnown RBP16.5■□□□□ 0.23
APP-208ENST00000439274 IBSPP21815 317 aaPredicted RBP16.5■□□□□ 0.23
APP-208ENST00000439274 PEX3P56589 373 aa16.5■□□□□ 0.23
APP-208ENST00000439274 ADCY2Q08462 1091 aa16.5■□□□□ 0.23
APP-208ENST00000439274 SNX1Q13596 522 aa16.5■□□□□ 0.23
APP-208ENST00000439274 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
APP-208ENST00000439274 RNF207Q6ZRF8 634 aa16.5■□□□□ 0.23
APP-208ENST00000439274 ART4Q93070 314 aa16.5■□□□□ 0.23
APP-208ENST00000439274 KIFC3Q9BVG8 833 aa16.5■□□□□ 0.23
APP-208ENST00000439274 CNOT7Q9UIV1 285 aaKnown RBP16.5■□□□□ 0.23
APP-208ENST00000439274 FOXO6A8MYZ6 492 aa16.5■□□□□ 0.23
APP-208ENST00000439274 NFIBO00712 420 aa16.5■□□□□ 0.23
APP-208ENST00000439274 RASGRF2O14827 1237 aa16.5■□□□□ 0.23
APP-208ENST00000439274 P4HA2O15460 535 aa16.5■□□□□ 0.23
APP-208ENST00000439274 MTA2O94776 668 aa16.5■□□□□ 0.23
APP-208ENST00000439274 AGTP01019 485 aa16.5■□□□□ 0.23
APP-208ENST00000439274 CYP1B1Q16678 543 aa16.5■□□□□ 0.23
APP-208ENST00000439274 UGCGQ16739 394 aa16.5■□□□□ 0.23
APP-208ENST00000439274 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
APP-208ENST00000439274 OTUD6AQ7L8S5 288 aa16.5■□□□□ 0.23
APP-208ENST00000439274 ELAC2Q9BQ52 826 aaKnown RBP16.5■□□□□ 0.23
APP-208ENST00000439274 PARP2Q9UGN5 583 aa16.5■□□□□ 0.23
APP-208ENST00000439274 HERC5Q9UII4 1024 aaKnown RBP16.5■□□□□ 0.23
APP-208ENST00000439274 MTUS1Q9ULD2 1270 aa16.5■□□□□ 0.23
APP-208ENST00000439274 CCT8L1PA6NM43 557 aa16.49■□□□□ 0.23
APP-208ENST00000439274 GGPS1O95749 300 aa16.49■□□□□ 0.23
APP-208ENST00000439274 VIMP08670 466 aaKnown RBP16.49■□□□□ 0.23
APP-208ENST00000439274 RARGP13631 454 aa16.49■□□□□ 0.23
APP-208ENST00000439274 CYP11B1P15538 503 aa16.49■□□□□ 0.23
APP-208ENST00000439274 CHRNA5P30532 468 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms