RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TSPY26PQ9H489 355 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 IFT22Q9H7X7 185 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 PHAXQ9H814 394 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 DBNDD1Q9H9R9 158 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 AGO4Q9HCK5 861 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 TRIM39Q9HCM9 518 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 TOPORSQ9NS56 1045 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 C1orf112Q9NSG2 853 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 ATP8A2Q9NTI2 1148 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 CEP72Q9P209 647 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 GIMAP2Q9UG22 337 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 STAP2Q9UGK3 403 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 XPO7Q9UIA9 1087 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 ZNF112Q9UJU3 913 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 RABL2BQ9UNT1 228 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 COA3Q9Y2R0 106 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 CRYL1Q9Y2S2 319 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 IQCA1LA6NCM1 817 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 TRIM64A6NGJ6 449 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 TRIM64BA6NI03 449 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 TPP1O14773 563 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 SUSD5O60279 629 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 APPP05067 770 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 TPM2P07951 284 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 MTHFD1P11586 935 aaKnown RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 NAT1P18440 290 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 CCND1P24385 295 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 KIF5BP33176 963 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 IL6STP40189 918 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLC6A11P48066 632 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 ERVK-21P61565 698 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 PLIN5Q00G26 463 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 PPFIA1Q13136 1202 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 ZNF460Q14592 562 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 ODF1Q14990 250 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 PRKD1Q15139 912 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 TERF2Q15554 542 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLC45A4Q5BKX6 768 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 RILPL1Q5EBL4 403 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 MROH9Q5TGP6 573 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 YOD1Q5VVQ6 348 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 TMC5Q6UXY8 1006 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 ARHGEF25Q86VW2 580 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 CMTR2Q8IYT2 770 aaKnown RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 ZCCHC14Q8WYQ9 949 aaKnown RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 HDAC2Q92769 488 aaKnown RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 USP7Q93009 1102 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 CHFRQ96EP1 664 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 CHAMP1Q96JM3 812 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 UBXN10Q96LJ8 280 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 LRRC37BQ96QE4 947 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 ADOQ96SZ5 270 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 NUDT16L1Q9BRJ7 211 aaKnown RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 ANP32EQ9BTT0 268 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLC26A6Q9BXS9 759 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 MRPL9Q9BYD2 267 aaKnown RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 MYLK2Q9H1R3 596 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 ARHGEF4Q9NR80 690 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 HELLSQ9NRZ9 838 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 DCAF16Q9NXF7 216 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 SEL1LQ9UBV2 794 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 TESMINQ9Y4I5 508 aa4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 WDR33Q9C0J8 1336 aaKnown RBP4.18□□□□□ -1.74
HMGB1P12-201ENST00000438594 TRBV23-1A0A0A0MS06 115 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 RRN3P2A6NIE6 340 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 M0R2C6 588 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 NOP56O00567 594 aaKnown RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 ZEB2O60315 1214 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 ZNF202O95125 648 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 CTNNA1P35221 906 aaKnown RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 NEK4P51957 841 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 INHBEP58166 350 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 FOXE3Q13461 319 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 SMC1AQ14683 1233 aaKnown RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 HSP90AB3PQ58FF7 597 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 C4orf50Q6ZRC1 276 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 SAMD14Q8IZD0 417 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 ARRDC4Q8NCT1 418 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 DEPTORQ8TB45 409 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLC35G2Q8TBE7 412 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 ADAMTS18Q8TE60 1221 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 HSPBAP1Q96EW2 488 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 VMP1Q96GC9 406 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 TMEM169Q96HH4 297 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 RCC1LQ96I51 464 aaKnown RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 TAAR9Q96RI9 348 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 WRNIP1Q96S55 665 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 SEC62Q99442 399 aaKnown RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 NUP88Q99567 741 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 CHCHD6Q9BRQ6 235 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 LMAN2LQ9H0V9 348 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 MEGF9Q9H1U4 602 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 EPN3Q9H201 632 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 SMOC1Q9H4F8 434 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 ELAC1Q9H777 363 aaKnown RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 PLEKHA5Q9HAU0 1116 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 DTLQ9NZJ0 730 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 NFKBIL1Q9UBC1 381 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 TBK1Q9UHD2 729 aa4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 PA2G4Q9UQ80 394 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms