RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 EXOC6BQ9Y2D4 811 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 FAN1Q9Y2M0 1017 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 MRPS23Q9Y3D9 190 aaKnown RBP12.75□□□□□ -0.37
RTN4-211ENST00000438462 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 FRMPD4Q14CM0 1322 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 NRP1O14786 923 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 GPR32O75388 356 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 DDHD2O94830 711 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 CEBPBP17676 345 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 GNAT2P19087 354 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 CTDSPL2Q05D32 466 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 DDX10Q13206 875 aaKnown RBP12.74□□□□□ -0.37
RTN4-211ENST00000438462 LY6DQ14210 128 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 SLC5A9Q2M3M2 681 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 C1orf228Q6PIY5 440 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 VITQ6UXI7 678 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 ZNF710Q8N1W2 664 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 GIMAP8Q8ND71 665 aaPredicted RBP12.74□□□□□ -0.37
RTN4-211ENST00000438462 TNPO1Q92973 898 aaKnown RBP12.74□□□□□ -0.37
RTN4-211ENST00000438462 B3GALT6Q96L58 329 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 MBOAT7Q96N66 472 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 ZFP14Q9HCL3 533 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 POLMQ9NP87 494 aaPredicted RBP12.74□□□□□ -0.37
RTN4-211ENST00000438462 FSCN3Q9NQT6 498 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 MAP3K20Q9NYL2 800 aaKnown RBP12.74□□□□□ -0.37
RTN4-211ENST00000438462 PRG3Q9Y2Y8 225 aaPredicted RBP12.74□□□□□ -0.37
RTN4-211ENST00000438462 ABCA7Q8IZY2 2146 aa12.74□□□□□ -0.37
RTN4-211ENST00000438462 ARNTLO00327 626 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 DHX16O60231 1041 aaKnown RBP12.73□□□□□ -0.37
RTN4-211ENST00000438462 ATP9AO75110 1047 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 KCNA2P16389 499 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 PSMC3P17980 439 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 POU3F2P20265 443 aaPredicted RBP12.73□□□□□ -0.37
RTN4-211ENST00000438462 EIF2S3P41091 472 aaKnown RBP12.73□□□□□ -0.37
RTN4-211ENST00000438462 PON2Q15165 354 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 TMPRSS7Q7RTY8 843 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 ERC1Q8IUD2 1116 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 NAPBQ9H115 298 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 AZI2Q9H6S1 392 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 POLR3BQ9NW08 1133 aaPredicted RBP12.73□□□□□ -0.37
RTN4-211ENST00000438462 DNMT3BQ9UBC3 853 aaKnown RBP12.73□□□□□ -0.37
RTN4-211ENST00000438462 APOBEC2Q9Y235 224 aaKnown RBP12.73□□□□□ -0.37
RTN4-211ENST00000438462 INVSQ9Y283 1065 aa12.73□□□□□ -0.37
RTN4-211ENST00000438462 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
RTN4-211ENST00000438462 M0R2C6 588 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 OPHN1O60890 802 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 OFD1O75665 1012 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 KRT10P13645 584 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 CD59P13987 128 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 HOXA9P31269 272 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 DHPSP49366 369 aaPredicted RBP12.72□□□□□ -0.37
RTN4-211ENST00000438462 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
RTN4-211ENST00000438462 ATXN3P54252 364 aaPredicted RBP12.72□□□□□ -0.37
RTN4-211ENST00000438462 CXADRP78310 365 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 MAPK6Q16659 721 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 FAM78AQ5JUQ0 283 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 SYNPOQ8N3V7 929 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.72□□□□□ -0.37
RTN4-211ENST00000438462 CSGALNACT1Q8TDX6 532 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 TMEM175Q9BSA9 504 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 GTPBP2Q9BX10 602 aaKnown RBP12.72□□□□□ -0.37
RTN4-211ENST00000438462 SLC4A5Q9BY07 1137 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 NACAP1Q9BZK3 213 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 BCL11AQ9H165 835 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.72□□□□□ -0.37
RTN4-211ENST00000438462 DACT1Q9NYF0 836 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 PCDHB9Q9Y5E1 797 aa12.72□□□□□ -0.37
RTN4-211ENST00000438462 NCANO14594 1321 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 SPECC1L-ADORA2AF8WAN1 911 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 ZNF263O14978 683 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 ZNF862O60290 1169 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 EFEMP2O95967 443 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 ALDH2P05091 517 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 IFIT2P09913 472 aaKnown RBP12.71□□□□□ -0.37
RTN4-211ENST00000438462 FGFR4P22455 802 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 ADSSP30520 456 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 CTHP32929 405 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 PHKA2P46019 1235 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 MLLT6P55198 1093 aaPredicted RBP12.71□□□□□ -0.37
RTN4-211ENST00000438462 SERINC3Q13530 473 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 CAMK2BQ13554 666 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 ZNF574Q6ZN55 896 aaPredicted RBP12.71□□□□□ -0.37
RTN4-211ENST00000438462 SLCO6A1Q86UG4 719 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 CAMKK1Q8N5S9 505 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 FAM200AQ8TCP9 573 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 APPBP2Q92624 585 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 WBP1Q96G27 269 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 APOL6Q9BWW8 343 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 AMNQ9BXJ7 453 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 C8orf33Q9H7E9 229 aaPredicted RBP12.71□□□□□ -0.37
RTN4-211ENST00000438462 FNIP2Q9P278 1114 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 FBN3Q75N90 2809 aa12.71□□□□□ -0.37
RTN4-211ENST00000438462 PCDH15Q96QU1 1955 aa12.7□□□□□ -0.38
RTN4-211ENST00000438462 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
RTN4-211ENST00000438462 TLX3O43711 291 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms