RNA–Protein interactions for RNA: ENST00000436881.2

C9orf172-201, Transcript of Uncharacterized protein C9orf172, humanhuman

APPRIS P1 BASIC

Gene C9orf172, Length 4,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172-201ENST00000436881 PFDN6O15212 129 aa17.12■□□□□ 0.33
C9orf172-201ENST00000436881 CIITAP33076 1130 aa17.12■□□□□ 0.33
C9orf172-201ENST00000436881 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
C9orf172-201ENST00000436881 IRAK1P51617 712 aa17.12■□□□□ 0.33
C9orf172-201ENST00000436881 SH2D3CQ8N5H7 860 aa17.12■□□□□ 0.33
C9orf172-201ENST00000436881 HVCN1Q96D96 273 aa17.12■□□□□ 0.33
C9orf172-201ENST00000436881 VCX3BQ9H321 246 aa17.12■□□□□ 0.33
C9orf172-201ENST00000436881 DDTLA6NHG4 134 aaPredicted RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 SAT1P21673 171 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 PMS2P54278 862 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 ATG4CQ96DT6 458 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 A0A087X0B3 334 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 HUS1O60921 280 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 MED24O75448 989 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 ECE1P42892 770 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 ARL13BQ3SXY8 428 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 PCGF5Q86SE9 256 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 SLC35G2Q8TBE7 412 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 DNAJC7Q99615 494 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 ABT1Q9ULW3 272 aaKnown RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 PRKCBP05771 671 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 SDC4P31431 198 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 SLC1A1P43005 524 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 CLNS1AP54105 237 aaKnown RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 TAP1Q03518 808 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 CCDC38Q502W7 563 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 LMBRD2Q68DH5 695 aaPredicted RBP17.11■□□□□ 0.33
C9orf172-201ENST00000436881 TMEM143Q96AN5 459 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 KLC2Q9H0B6 622 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 PARVAQ9NVD7 372 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 GGA3Q9NZ52 723 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 SLC12A6Q9UHW9 1150 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
C9orf172-201ENST00000436881 SPDYE2BA6NHP3 402 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 SPDYE6P0CI01 402 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 SLC8A1P32418 973 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 RPS6KA2Q15349 733 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 KYAT1Q16773 422 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 MAP3K21Q5TCX8 1036 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 PPP1R12CQ9BZL4 782 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 HSD3B7Q9H2F3 369 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 DUSP10Q9Y6W6 482 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 GRIN3BO60391 1043 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 KLRC1P26715 233 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 ACOT2P49753 483 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 PLA2G4FQ68DD2 849 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 TWF2Q6IBS0 349 aaKnown RBP17.1■□□□□ 0.33
C9orf172-201ENST00000436881 PHLDB3Q6NSJ2 640 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 KLHL29Q96CT2 875 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 TTC25Q96NG3 672 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 C17orf75Q9HAS0 396 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 AFG3L2Q9Y4W6 797 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
C9orf172-201ENST00000436881 IQANK1A0A1B0GTG1 560 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 ARHGAP42A6NI28 874 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 NPEPPSP55786 919 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 PRKCEQ02156 737 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 NUGGCQ68CJ6 796 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
C9orf172-201ENST00000436881 AGPAT3Q9NRZ7 376 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 KIF1AQ12756 1690 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 NR1H3Q13133 447 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 FBXW10Q5XX13 1052 aa17.1■□□□□ 0.33
C9orf172-201ENST00000436881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf172-201ENST00000436881 TMEM253P0C7T8 217 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 SHMT1P34896 483 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 GSDMBQ8TAX9 411 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 GPRASP2Q96D09 838 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 LACRTQ9GZZ8 138 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 M0QYV0 167 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 KRT37O76014 449 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 MAGOHP61326 146 aaKnown RBP17.09■□□□□ 0.33
C9orf172-201ENST00000436881 CHST13Q8NET6 341 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 RNF139Q8WU17 664 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 ACTR5Q9H9F9 607 aaPredicted RBP17.09■□□□□ 0.33
C9orf172-201ENST00000436881 DDX56Q9NY93 547 aaKnown RBP17.09■□□□□ 0.33
C9orf172-201ENST00000436881 MAP3K20Q9NYL2 800 aaKnown RBP17.09■□□□□ 0.33
C9orf172-201ENST00000436881 PCSK1NQ9UHG2 260 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 IGSF9BQ9UPX0 1349 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 MMEP08473 750 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 TPD52P55327 224 aaPredicted RBP17.09■□□□□ 0.33
C9orf172-201ENST00000436881 FAF2Q96CS3 445 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 VCXQ9H320 206 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 ELP3Q9H9T3 547 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 GPBP1L1Q9HC44 474 aaPredicted RBP17.09■□□□□ 0.33
C9orf172-201ENST00000436881 TMEM8AQ9HCN3 771 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 PFDN4Q9NQP4 134 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
C9orf172-201ENST00000436881 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.33
C9orf172-201ENST00000436881 RFC5P40937 340 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms