RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 KSR1Q8IVT5 923 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 FAM178BQ8IXR5 827 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 EXOC8Q8IYI6 725 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 PCSK9Q8NBP7 692 aaKnown RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 TMEM161BQ8NDZ6 487 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 TCP11Q8WWU5 503 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 P2RX5Q93086 422 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 DUSP9Q99956 384 aaKnown RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 C2orf49Q9BVC5 232 aaPredicted RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 KIFC3Q9BVG8 833 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 KATNAL1Q9BW62 490 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 IKZF4Q9H2S9 585 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 KCTD10Q9H3F6 313 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 ST6GALNAC4Q9H4F1 302 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 GRPEL1Q9HAV7 217 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 FANCLQ9NW38 375 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 SUCLA2Q9P2R7 463 aaPredicted RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 HDAC6Q9UBN7 1215 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 RWDD2AQ9UIY3 292 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 MGAMO43451 1857 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 ADGRA3Q8IWK6 1321 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 NRCAMQ92823 1304 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 A0A1W2PRU2 124 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 TRIM49BA6NDI0 452 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 CCDC169A6NNP5 214 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 K7ENM7 598 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 PSMA7O14818 248 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 EIF3DO15371 548 aaKnown RBP eCLIP7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 TGFB1I1O43294 461 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 CCNE1P24864 410 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 MPSTP25325 297 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 NAMPTP43490 491 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 CLCN3P51790 818 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNF200P98182 395 aaPredicted RBP7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 GTF2BQ00403 316 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 MYL5Q02045 173 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 LAMTOR4Q0VGL1 99 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 DMP1Q13316 513 aaPredicted RBP7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 STIM1Q13586 685 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 CAPSQ13938 189 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 KNOP1Q1ED39 458 aaKnown RBP7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 ZCWPW2Q504Y3 356 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 NFRKBQ6P4R8 1299 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 RUFY4Q6ZNE9 571 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 SLC9A9Q8IVB4 645 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 NELFCDQ8IXH7 590 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 KIAA0319LQ8IZA0 1049 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 METTL13Q8N6R0 699 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 C7orf31Q8N865 590 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 ARRDC4Q8NCT1 418 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 PSPC1Q8WXF1 523 aaKnown RBP7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 KCNN1Q92952 543 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 IFT74Q96LB3 600 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 DEFB118Q96PH6 123 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 JPH2Q9BR39 696 aaPredicted RBP7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 RNF208Q9H0X6 261 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 KMT5AQ9NQR1 393 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 ARHGAP28Q9P2N2 729 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 KIAA1217Q5T5P2 1943 aa7.73□□□□□ -1.17
LSM3P3-201ENST00000436601 ZMYM2Q9UBW7 1377 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 C17orf102A2RUQ5 167 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 DENND3A2RUS2 1198 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 SMTNL1A8MU46 457 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 BECN2A8MW95 431 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 TREHO43280 583 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 AP5Z1O43299 807 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 CABYRO75952 493 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 KIF20AO95235 890 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 STAU1O95793 577 aaKnown RBP7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 SRGAP2CP0DJJ0 459 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 MRE11P49959 708 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 DNM2P50570 870 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 ITGA7Q13683 1181 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 ALCAMQ13740 583 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 MXD4Q14582 209 aaPredicted RBP7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 PPP2R5AQ15172 486 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 PKN2Q16513 984 aaKnown RBP7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 UVSSAQ2YD98 709 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 L1TD1Q5T7N2 865 aaKnown RBP7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 CDKAL1Q5VV42 579 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 GDF6Q6KF10 455 aaPredicted RBP7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 FOXR2Q6PJQ5 311 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 TMC7Q7Z402 723 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 SESTD1Q86VW0 696 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 IRF2BP1Q8IU81 584 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 RHPN2Q8IUC4 686 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 SLC17A8Q8NDX2 589 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 ARMC5Q96C12 935 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 MYO19Q96H55 970 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNF333Q96JL9 665 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNF668Q96K58 619 aaPredicted RBP7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 CTAGE1Q96RT6 745 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 SAMSN1Q9NSI8 373 aaKnown RBP7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 STIM2Q9P246 746 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 GTF2IRD1Q9UHL9 959 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 KCNG1Q9UIX4 513 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 OGDHLQ9ULD0 1010 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 TBX20Q9UMR3 447 aa7.72□□□□□ -1.17
LSM3P3-201ENST00000436601 PHF24Q9UPV7 400 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms