RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 PLAURQ03405 335 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 ITIH3Q06033 890 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 RSPO4Q2I0M5 234 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 SLC35G1Q2M3R5 365 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 CES5AQ6NT32 575 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 SYCE2Q6PIF2 218 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 KRT25Q7Z3Z0 450 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 SAP130Q9H0E3 1048 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 FAM49AQ9H0Q0 323 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 AZI2Q9H6S1 392 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 TELO2Q9Y4R8 837 aa9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 FNDC1Q4ZHG4 1894 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 KMT2BQ9UMN6 2715 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-208ENST00000436412 SMIM35A0A1B0GVV1 85 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 TBKBP1A7MCY6 615 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 CYTH3O43739 400 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 SASH3O75995 380 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 LAG3P18627 525 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 MARK3P27448 753 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 PPM1AP35813 382 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 GATMP50440 423 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 IGBP1P78318 339 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 RBM10P98175 930 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 TRDNQ13061 729 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 NKAPLQ5M9Q1 402 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 CWC27Q6UX04 472 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 SLC24A5Q71RS6 500 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 PLPPR4Q7Z2D5 763 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 TMEM105Q8N8V8 129 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 COLGALT1Q8NBJ5 622 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 MRPS27Q92552 414 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 CASP10Q92851 521 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 TMX1Q9H3N1 280 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 TPSG1Q9NRR2 321 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 DIAPH3Q9NSV4 1193 aa9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 TYW1Q9NV66 732 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 MAP1BP46821 2468 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-208ENST00000436412 CNOT1A5YKK6 2376 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ATRXP46100 2492 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ERICH2A1L162 156 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 DENND3A2RUS2 1198 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 MEIS2O14770 477 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ATP9AO75110 1047 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 RPS6KA5O75582 802 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 BRD1O95696 1058 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 SMARCA1P28370 1054 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 MTHFRP42898 656 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 KRT17Q04695 432 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 TROAPQ12815 778 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 HDAC1Q13547 482 aaPredicted RBP9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 SART3Q15020 963 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 PERM1Q5SV97 790 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 USP17L6PQ6QN14 398 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 CAPN12Q6ZSI9 719 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 FRMD5Q7Z6J6 570 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 FAM35AQ86V20 835 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 TREML1Q86YW5 311 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ZDHHC14Q8IZN3 488 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ADSSL1Q8N142 457 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ADAM2Q99965 735 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ADAM7Q9H2U9 754 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 MFSD1Q9H3U5 465 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ELAC1Q9H777 363 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 ENTPD7Q9NQZ7 604 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 RGS18Q9NS28 235 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 KCNMB2Q9Y691 235 aa9.59□□□□□ -0.87
NIF3L1-208ENST00000436412 CEP295Q9C0D2 2601 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 EVPLQ92817 2033 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 C2CD4DB7Z1M9 353 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 C9IYK1 514 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 IFIT3O14879 490 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 GPR182O15218 404 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 ATG7O95352 703 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 CPB1P15086 417 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 ITGB5P18084 799 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 SLC26A2P50443 739 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 GPLD1P80108 840 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 FAM189BP81408 668 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 TMEM62Q0P6H9 643 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 MTMR1Q13613 665 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 PLCB4Q15147 1175 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 FAM102BQ5T8I3 360 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 PLPP4Q5VZY2 271 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 MTHFD1LQ6UB35 978 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 CYB5R4Q7L1T6 521 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 CATIPQ7Z7H3 387 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 ETFBKMTQ8IXQ9 262 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 RRP36Q96EU6 259 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 NACC1Q96RE7 527 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 PCYT2Q99447 389 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 MAP3K14Q99558 947 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 TCF25Q9BQ70 676 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 SPZ1Q9BXG8 430 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 TMEM117Q9H0C3 514 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 SEMA4AQ9H3S1 761 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 CWH43Q9H720 699 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 ATP6V0A4Q9HBG4 840 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms