RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 DRC1Q96MC2 740 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 ADPGKQ9BRR6 497 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 APOL5Q9BWW9 433 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 VN1R3Q9BXE9 311 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 SNTG2Q9NY99 539 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 NPHP3-ACAD11A0A0J9YXS1 232 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 INPPL1O15357 1258 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 CEBPZQ03701 1054 aaKnown RBP20.17■□□□□ 0.82
HMGN1-207ENST00000436324 MAPK7Q13164 816 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 DMP1Q13316 513 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-207ENST00000436324 DHX8Q14562 1220 aaKnown RBP20.17■□□□□ 0.82
HMGN1-207ENST00000436324 SMAD2Q15796 467 aaKnown RBP20.17■□□□□ 0.82
HMGN1-207ENST00000436324 TMEM119Q4V9L6 283 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 SYT2Q8N9I0 419 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-207ENST00000436324 RASSF8Q8NHQ8 419 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 AK8Q96MA6 479 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 RPS6KC1Q96S38 1066 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 KMT5AQ9NQR1 393 aa20.17■□□□□ 0.82
HMGN1-207ENST00000436324 SLC16A4O15374 487 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 CLASP2O75122 1294 aaKnown RBP20.16■□□□□ 0.82
HMGN1-207ENST00000436324 CTSAP10619 480 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 SLC12A3P55017 1021 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 CACNB1Q02641 598 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-207ENST00000436324 COASYQ13057 564 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 ATF7IP2Q5U623 682 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 SMRP1Q8NCR6 262 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 GSTCDQ8NEC7 633 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 RABGGTAQ92696 567 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 KHSRPQ92945 711 aaKnown RBP eCLIP20.16■□□□□ 0.821e-7■■□□□ 13.3
HMGN1-207ENST00000436324 MARCH5Q9NX47 278 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 GDAQ9Y2T3 454 aa20.16■□□□□ 0.82
HMGN1-207ENST00000436324 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 F8W810 466 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 SRGAP2BP0DMP2 458 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 GUCY2CP25092 1073 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 MARCKSP29966 332 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-207ENST00000436324 LONP1P36776 959 aaKnown RBP20.15■□□□□ 0.82
HMGN1-207ENST00000436324 ZP2Q05996 745 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 DSC1Q08554 894 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 KCNC3Q14003 757 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 KARSQ15046 597 aaKnown RBP20.15■□□□□ 0.82
HMGN1-207ENST00000436324 SPECC1Q5M775 1068 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 ANKRD54Q6NXT1 300 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 LRRC15Q8TF66 581 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 EPHX3Q9H6B9 360 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 CACNG4Q9UBN1 327 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 MTMR6Q9Y217 621 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 USP15Q9Y4E8 981 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-207ENST00000436324 XIRP2A4UGR9 3374 aa20.15■□□□□ 0.82
HMGN1-207ENST00000436324 NR1I2O75469 434 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 RECQL4O94761 1208 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 GRIK3Q13003 919 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 TAS1R3Q7RTX0 852 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 TAS1R1Q7RTX1 841 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 ADHFE1Q8IWW8 467 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 TIPINQ9BVW5 301 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 COLEC11Q9BWP8 271 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 CXCL16Q9H2A7 254 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 PRKAG3Q9UGI9 489 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 HCFC2Q9Y5Z7 792 aa20.14■□□□□ 0.81
HMGN1-207ENST00000436324 PHLPP2Q6ZVD8 1323 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 C2CD2LO14523 706 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 STX6O43752 255 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 PLCG1P19174 1290 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 MCM6Q14566 821 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 PTPAQ15257 358 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 PTPN14Q15678 1187 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 DCAF4L1Q3SXM0 396 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 ARSHQ5FYA8 562 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 TMEM184AQ6ZMB5 413 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 ZBTB33Q86T24 672 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 GPBP1Q86WP2 473 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 HSCBQ8IWL3 235 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 KCTD17Q8N5Z5 321 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 CASP10Q92851 521 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 SNX21Q969T3 373 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 ACO2Q99798 780 aaKnown RBP20.13■□□□□ 0.81
HMGN1-207ENST00000436324 TARS2Q9BW92 718 aaKnown RBP20.13■□□□□ 0.81
HMGN1-207ENST00000436324 TMEM134Q9H6X4 195 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 ARHGAP28Q9P2N2 729 aa20.13■□□□□ 0.81
HMGN1-207ENST00000436324 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
HMGN1-207ENST00000436324 SLC26A4O43511 780 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 PLS3P13797 630 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 GIT2Q14161 759 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-207ENST00000436324 SYCE2Q6PIF2 218 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-207ENST00000436324 EPSTI1Q96J88 318 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 CLIC6Q96NY7 704 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 MRPL4Q9BYD3 311 aaKnown RBP20.12■□□□□ 0.81
HMGN1-207ENST00000436324 C17orf75Q9HAS0 396 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 BLOC1S4Q9NUP1 217 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 TNFSF13BQ9Y275 285 aa20.12■□□□□ 0.81
HMGN1-207ENST00000436324 CASTOR2A6NHX0 329 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 PTGESO14684 152 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 SOD2P04179 222 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 THP07101 528 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 HARSP12081 509 aaKnown RBP20.11■□□□□ 0.81
HMGN1-207ENST00000436324 EPCAMP16422 314 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms