RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 B4GALT5O43286 388 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 STX10O60499 249 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 TSPAN1O60635 241 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
TMEM40-204ENST00000435218 ERLIN2O94905 339 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 ARF4P18085 180 aaPredicted RBP16.42■□□□□ 0.22
TMEM40-204ENST00000435218 FMO5P49326 533 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 CLDN10P78369 228 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 KCNMA1Q12791 1236 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 PKN2Q16513 984 aaKnown RBP16.42■□□□□ 0.22
TMEM40-204ENST00000435218 FAM47CQ5HY64 1035 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 C1orf220Q5T0J3 134 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 TCERG1LQ5VWI1 586 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 PPFIBP1Q86W92 1011 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 FAM213AQ9BRX8 229 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 EDEM3Q9BZQ6 932 aa16.42■□□□□ 0.22
TMEM40-204ENST00000435218 A0A1B0GUA9 196 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
TMEM40-204ENST00000435218 TPM1P09493 284 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 MCF2P10911 925 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 CCL5P13501 91 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 AXLP30530 894 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 GTF2H1P32780 548 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 MRPS6P82932 125 aaKnown RBP16.41■□□□□ 0.22
TMEM40-204ENST00000435218 PTK7Q13308 1070 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 PSMD6Q15008 389 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 SNX17Q15036 470 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 CNGA4Q8IV77 575 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 LRRC8AQ8IWT6 810 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 TC2NQ8N9U0 490 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 PLEKHO2Q8TD55 490 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 PPP1R16BQ96T49 567 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 OSMRQ99650 979 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 CELF4Q9BZC1 486 aaKnown RBP16.41■□□□□ 0.22
TMEM40-204ENST00000435218 PDZD7Q9H5P4 517 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 CDHR5Q9HBB8 845 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 PLCB1Q9NQ66 1216 aa16.41■□□□□ 0.22
TMEM40-204ENST00000435218 A0A0U1RQG5 324 aaPredicted RBP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 AKR1B15C9JRZ8 316 aaPredicted RBP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 M0QZ92 97 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 MFAP3LO75121 409 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CAND2O75155 1236 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 TRIM49P0CI25 452 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 TRIM49CP0CI26 452 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 MATR3P43243 847 aaKnown RBP eCLIP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 DLG4P78352 724 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 RBL2Q08999 1139 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 TMEM62Q0P6H9 643 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 ARID5BQ14865 1188 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 MTFR1Q15390 333 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 PTGISQ16647 500 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 KYAT1Q16773 422 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 ZNF568Q3ZCX4 644 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 EEF1DP3Q658K8 133 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 GBP6Q6ZN66 633 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 BRSK2Q8IWQ3 736 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CACTINQ8WUQ7 758 aaKnown RBP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 TCHPQ9BT92 498 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CDT1Q9H211 546 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 STARD7Q9NQZ5 370 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 FBXL5Q9UKA1 691 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CPSF3Q9UKF6 684 aaKnown RBP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CAPN11Q9UMQ6 739 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 TRPV2Q9Y5S1 764 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CSDE1O75534 798 aaKnown RBP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 TRIM21P19474 475 aaKnown RBP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CASP14P31944 242 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 ACOT2P49753 483 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 FXR1P51114 621 aaKnown RBP eCLIP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 NCBP1Q09161 790 aaKnown RBP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 MGAT3Q09327 533 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 EXOC3L4Q17RC7 722 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 ARMC5Q96C12 935 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 RNF208Q9H0X6 261 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 AGPAT5Q9NUQ2 364 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
TMEM40-204ENST00000435218 DAAM1Q9Y4D1 1078 aa16.4■□□□□ 0.22
TMEM40-204ENST00000435218 TANC1Q9C0D5 1861 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 LRRIQ3A6PVS8 624 aaPredicted RBP16.39■□□□□ 0.21
TMEM40-204ENST00000435218 CTCFP49711 727 aaPredicted RBP16.39■□□□□ 0.21
TMEM40-204ENST00000435218 KLK7P49862 253 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 MYL7Q01449 175 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 PPP3CAQ08209 521 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 SURF1Q15526 300 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 TMEM132AQ24JP5 1023 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 TRIM71Q2Q1W2 868 aaKnown RBP16.39■□□□□ 0.21
TMEM40-204ENST00000435218 DCAF4L1Q3SXM0 396 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 CBWD6Q4V339 395 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 CBWD3Q5JTY5 395 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 CBWD5Q5RIA9 395 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 DPY19L2P1Q6NXN4 242 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 CATSPER4Q7RTX7 472 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 APBB1IPQ7Z5R6 666 aaPredicted RBP16.39■□□□□ 0.21
TMEM40-204ENST00000435218 CCDC112Q8NEF3 446 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 NEK11Q8NG66 645 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 TMEM40Q8WWA1 233 aa16.39■□□□□ 0.21
TMEM40-204ENST00000435218 WNT8BQ93098 351 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms