RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
CHRNA1-207ENST00000435083 TRIM6Q9C030 488 aaPredicted RBP12.92□□□□□ -0.34
CHRNA1-207ENST00000435083 CSRNP2Q9H175 543 aa12.92□□□□□ -0.34
CHRNA1-207ENST00000435083 CHST7Q9NS84 486 aa12.92□□□□□ -0.34
CHRNA1-207ENST00000435083 ZDHHC7Q9NXF8 308 aa12.92□□□□□ -0.34
CHRNA1-207ENST00000435083 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHRNA1-207ENST00000435083 MTCL1Q9Y4B5 1905 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-207ENST00000435083 DOCK8Q8NF50 2099 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 CCNT1O60563 726 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 RPL17P18621 184 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 PTENP60484 403 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 CYP4A11Q02928 519 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 TFDP1Q14186 410 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 CTTNQ14247 550 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 MXD4Q14582 209 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 USP41Q3LFD5 358 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 FUT10Q6P4F1 479 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 NEK8Q86SG6 692 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 HACE1Q8IYU2 909 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 RABGGTAQ92696 567 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 RMDN1Q96DB5 314 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 ARHGEF3Q9NR81 526 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 FNIP2Q9P278 1114 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 GIT1Q9Y2X7 761 aa12.91□□□□□ -0.34
CHRNA1-207ENST00000435083 SP9P0CG40 484 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 AKAP5P24588 427 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 HTR4Q13639 388 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 PCBP1Q15365 356 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 PPP4R3AQ6IN85 833 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 LILRA6Q6PI73 481 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 ZC3H14Q6PJT7 736 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 TPH2Q8IWU9 490 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 FAM177A1Q8N128 213 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 HAS1Q92839 578 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 NXF3Q9H4D5 531 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 ZSWIM4Q9H7M6 989 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 XPNPEP1Q9NQW7 623 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 KLK14Q9P0G3 267 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 ADAM28Q9UKQ2 775 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 NUMBLQ9Y6R0 609 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 ARID2Q68CP9 1835 aa12.9□□□□□ -0.34
CHRNA1-207ENST00000435083 ANHXE9PGG2 379 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 TBX3O15119 743 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 TADA2AO75478 443 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 ZMYND10O75800 440 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 BAG4O95429 457 aaKnown RBP12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 NPTXRO95502 500 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 C1RP00736 705 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 ARF4P18085 180 aaPredicted RBP12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 FSHRP23945 695 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 POTEGQ6S5H5 508 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 PRSS55Q6UWB4 352 aaPredicted RBP12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 PIK3AP1Q6ZUJ8 805 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 DGLUCYQ7Z3D6 616 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 CDR2LQ86X02 465 aaPredicted RBP12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 C1orf210Q8IVY1 113 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 PHF20Q9BVI0 1012 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 FOXQ1Q9C009 403 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 SLC2A4RGQ9NR83 387 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 DLGAP2Q9P1A6 1054 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 PARP2Q9UGN5 583 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 CYP46A1Q9Y6A2 500 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 MYO15AQ9UKN7 3530 aa12.9□□□□□ -0.35
CHRNA1-207ENST00000435083 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 LRRN2O75325 713 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 REC8O95072 547 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 PAPLNO95428 1278 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 GPC5P78333 572 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 CREMQ03060 361 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 MBTD1Q05BQ5 628 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 CAPSQ13938 189 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 AMHR2Q16671 573 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 GRASPQ7Z6J2 395 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 GPR65Q8IYL9 337 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 PJA1Q8NG27 643 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 ASAP3Q8TDY4 903 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 SHDQ96IW2 340 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 RPP25Q9BUL9 199 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 CACNG4Q9UBN1 327 aa12.89□□□□□ -0.35
CHRNA1-207ENST00000435083 POTEMA6NI47 508 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 B4GALT5O43286 388 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 SLITRK3O94933 977 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 NTHL1P78549 312 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 POU5F1BQ06416 359 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 GRIK3Q13003 919 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 SLC27A1Q6PCB7 646 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 PARM1Q6UWI2 310 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 CEP57Q86XR8 500 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 GSTCDQ8NEC7 633 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms