RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.21□□□□□ -0.61
SCAF4-203ENST00000434667 NUMBLQ9Y6R0 609 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 A0A1B0GVG6 124 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 SUN1O94901 812 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 GJB6O95452 261 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 AGTP01019 485 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 FERP16591 822 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 GTF2IP78347 998 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 KRT17Q04695 432 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 ARMC9Q7Z3E5 817 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 SLC47A2Q86VL8 602 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 DNAJC18Q9H819 358 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 ZBTB21Q9ULJ3 1066 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.62
SCAF4-203ENST00000434667 C2orf71A6NGG8 1288 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 SRRM3A6NNA2 597 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 BTNL10A8MVZ5 291 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 CES2O00748 559 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 GNPATO15228 680 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 CALUO43852 315 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 TMEM253P0C7T8 217 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 COILP38432 576 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 GPSM2P81274 684 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 OVGP1Q12889 678 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 RRP1BQ14684 758 aaKnown RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 EDRF1Q3B7T1 1238 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 MIGA2Q7L4E1 593 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 C3orf20Q8ND61 904 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 MAGEC3Q8TD91 643 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 UCMAQ8WVF2 138 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 LRRC27Q9C0I9 530 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 WRAP73Q9P2S5 460 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 MTRF1LQ9UGC7 380 aaKnown RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 TTC7AQ9ULT0 858 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 TRAF3IP3Q9Y228 551 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 POC1B-GALNT4F8VUJ3 575 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 CYP26A1O43174 497 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 CLK2P49760 499 aaKnown RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 ARHGAP4P98171 946 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 ATP11AP98196 1134 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 ADCY2Q08462 1091 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 SPIRE1Q08AE8 756 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 RFWD3Q6PCD5 774 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 RNF207Q6ZRF8 634 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 INTS8Q75QN2 995 aaKnown RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 ARMC2Q8NEN0 867 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 CENPTQ96BT3 561 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 KLF6Q99612 283 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 CARD9Q9H257 536 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 ZMYM2Q9UBW7 1377 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 EXOC3O60645 756 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 FAM13AO94988 1023 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 ITGA8P53708 1063 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 NFIAQ12857 509 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 GRIK3Q13003 919 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 SEMA3FQ13275 785 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 GALNTL6Q49A17 601 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 C10orf76Q5T2E6 689 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 SYCP3Q8IZU3 236 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 WDR66Q8TBY9 1149 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 DTX3LQ8TDB6 740 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 SLC5A5Q92911 643 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 ZSWIM1Q9BR11 485 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 KIAA1683Q9H0B3 1180 aa11.2□□□□□ -0.62
SCAF4-203ENST00000434667 SPATS2LQ9NUQ6 558 aaKnown RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 ZNF219Q9P2Y4 722 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-203ENST00000434667 THAP12O43422 761 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 CTCFP49711 727 aaPredicted RBP11.19□□□□□ -0.62
SCAF4-203ENST00000434667 RBM5P52756 815 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCAF4-203ENST00000434667 GSTA5Q7RTV2 222 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 MAB21L3Q8N8X9 362 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 PHC3Q8NDX5 983 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 TBC1D16Q8TBP0 767 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.19□□□□□ -0.625e-7■■■□□ 16
SCAF4-203ENST00000434667 DYDC2Q96IM9 177 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 AGPAT1Q99943 283 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 NSRP1Q9H0G5 558 aaKnown RBP11.19□□□□□ -0.62
SCAF4-203ENST00000434667 TYW1Q9NV66 732 aaKnown RBP11.19□□□□□ -0.62
SCAF4-203ENST00000434667 RASAL2Q9UJF2 1139 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 DCTN4Q9UJW0 460 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 GRID1Q9ULK0 1009 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 USP20Q9Y2K6 914 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 ZBTB5O15062 677 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 OAS1P00973 400 aaKnown RBP11.19□□□□□ -0.62
SCAF4-203ENST00000434667 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 PPP3CAQ08209 521 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 RNF220Q5VTB9 566 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 CDCA2Q69YH5 1023 aaPredicted RBP11.19□□□□□ -0.62
SCAF4-203ENST00000434667 RINT1Q6NUQ1 792 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 EPM2AIP1Q7L775 607 aaPredicted RBP11.19□□□□□ -0.62
SCAF4-203ENST00000434667 ZNF804AQ7Z570 1209 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 COL23A1Q86Y22 540 aaPredicted RBP11.19□□□□□ -0.62
SCAF4-203ENST00000434667 CCDC127Q96BQ5 260 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 SAAL1Q96ER3 474 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 C10orf88Q9H8K7 445 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 CD209Q9NNX6 404 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 EMSYQ7Z589 1322 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 ESYT2A0FGR8 921 aa11.19□□□□□ -0.62
SCAF4-203ENST00000434667 GOLGA8RI6L899 631 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms