RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 TET1Q8NFU7 2136 aa13.46□□□□□ -0.26
LINC00339-204ENST00000434233 SMTNL1A8MU46 457 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 TISP43B9A030 160 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 ENPP3O14638 875 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 CETN3O15182 167 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 OGTO15294 1046 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 MGEA5O60502 916 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 ZNF623O75123 536 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 FGFR1OPO95684 399 aaKnown RBP13.45□□□□□ -0.26
LINC00339-204ENST00000434233 NR3C1P04150 777 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 SKIP12755 728 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 MATR3P43243 847 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00339-204ENST00000434233 FAM189BP81408 668 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 POU5F1Q01860 360 aaKnown RBP13.45□□□□□ -0.26
LINC00339-204ENST00000434233 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-204ENST00000434233 ZNF568Q3ZCX4 644 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 UBXN11Q5T124 520 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
LINC00339-204ENST00000434233 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 ZBTB33Q86T24 672 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 CDR2LQ86X02 465 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-204ENST00000434233 FBXL18Q96ME1 805 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 CEP63Q96MT8 703 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 ADAM2Q99965 735 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 CBWD1Q9BRT8 395 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 CDT1Q9H211 546 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-204ENST00000434233 PCIF1Q9H4Z3 704 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 KIAA1586Q9HCI6 787 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 C1orf112Q9NSG2 853 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 HSPBP1Q9NZL4 362 aa13.45□□□□□ -0.26
LINC00339-204ENST00000434233 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
LINC00339-204ENST00000434233 A0A0U1RQF3 1178 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 ABHD14A-ACY1A0A1B0GW23 586 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 IKBKBO14920 756 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 MAPK13O15264 365 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 NPTXRO95502 500 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 SYN1P17600 705 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 NR2F2P24468 414 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 RAB27AP51159 221 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 FPGSQ05932 587 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 IKBKEQ14164 716 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 NOLC1Q14978 699 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00339-204ENST00000434233 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
LINC00339-204ENST00000434233 SLC24A5Q71RS6 500 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
LINC00339-204ENST00000434233 GPD1LQ8N335 351 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 CSGALNACT2Q8N6G5 542 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 XXYLT1Q8NBI6 393 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
LINC00339-204ENST00000434233 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
LINC00339-204ENST00000434233 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
LINC00339-204ENST00000434233 FAM105AQ9NUU6 356 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 ANKFY1Q9P2R3 1169 aa13.44□□□□□ -0.26
LINC00339-204ENST00000434233 C9IYK1 514 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 EXTL3O43909 919 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 EXOC3O60645 756 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 EFCAB14O75071 495 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 EOMESO95936 686 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 FGBP02675 491 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 ACTN1P12814 892 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 GRM5P41594 1212 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 MYL5Q02045 173 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 IQCB1Q15051 598 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 TCTN1Q2MV58 587 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 THNSL1Q8IYQ7 743 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 LBHD1Q9BQE6 289 aaPredicted RBP13.43□□□□□ -0.26
LINC00339-204ENST00000434233 MKNK1Q9BUB5 465 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
LINC00339-204ENST00000434233 ELAC1Q9H777 363 aaKnown RBP13.43□□□□□ -0.26
LINC00339-204ENST00000434233 CBX8Q9HC52 389 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 CPSF3Q9UKF6 684 aaKnown RBP13.43□□□□□ -0.26
LINC00339-204ENST00000434233 ZMYND8Q9ULU4 1186 aaPredicted RBP13.43□□□□□ -0.26
LINC00339-204ENST00000434233 FRMD4BQ9Y2L6 1034 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 PCDHB2Q9Y5E7 798 aa13.43□□□□□ -0.26
LINC00339-204ENST00000434233 LTBP2Q14767 1821 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.42□□□□□ -0.26
LINC00339-204ENST00000434233 ZNF233A6NK53 670 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 BECN2A8MW95 431 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 FAM189A1O60320 539 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 BAIAP3O94812 1187 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 GNA14O95837 355 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 CLTAP09496 248 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 ACRP10323 421 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 PSMC2P35998 433 aaKnown RBP13.42□□□□□ -0.26
LINC00339-204ENST00000434233 CYP2J2P51589 502 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 MCCD1P59942 119 aaPredicted RBP13.42□□□□□ -0.26
LINC00339-204ENST00000434233 NCAPHQ15003 741 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 CRELD2Q6UXH1 353 aaPredicted RBP13.42□□□□□ -0.26
LINC00339-204ENST00000434233 LRRC55Q6ZSA7 311 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 C16orf59Q7L2K0 433 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 DHX40Q8IX18 779 aaKnown RBP13.42□□□□□ -0.26
LINC00339-204ENST00000434233 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 SMG8Q8ND04 991 aaKnown RBP13.42□□□□□ -0.26
LINC00339-204ENST00000434233 LINC01599Q8WXQ3 324 aa13.42□□□□□ -0.26
LINC00339-204ENST00000434233 PGBD4Q96DM1 585 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms