RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 NFIAQ12857 509 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 GRB10Q13322 594 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 AUHQ13825 339 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 QRICH1Q2TAL8 776 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 SYDE2Q5VT97 1194 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 WDR78Q5VTH9 848 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 HHIPL2Q6UWX4 724 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 LRRC55Q6ZSA7 311 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 EPM2AIP1Q7L775 607 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 TPH2Q8IWU9 490 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 CFAP61Q8NHU2 1237 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 DDX50Q9BQ39 737 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 GORASP1Q9BQQ3 440 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 ANO3Q9BYT9 981 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 ZFP69BQ9UJL9 534 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 NWD2Q9ULI1 1742 aa7.92□□□□□ -1.14
SYNPO2-203ENST00000434046 A0A1B0GVG6 124 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CFAP69A5D8W1 941 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 LIN7AO14910 233 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 RIPK2O43353 540 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 NOL4O94818 638 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 UNC5CO95185 931 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CA4P22748 312 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 RPL13P26373 211 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 PTENP60484 403 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 DEUP1Q05D60 604 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CETN1Q12798 172 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 DHX34Q14147 1143 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 DBN1Q16643 649 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 NSMFQ6X4W1 530 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 PPP1R21Q6ZMI0 780 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 NT5DC3Q86UY8 548 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 UCMAQ8WVF2 138 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 C1orf54Q8WWF1 131 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 KIFAP3Q92845 792 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 EPAS1Q99814 870 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 MOV10L1Q9BXT6 1211 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ERVK-5Q9HDB9 667 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CYP39A1Q9NYL5 469 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 SPEF2Q9C093 1822 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 MYH7BA7E2Y1 1941 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 A0A0G2JND7 137 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 GAS7O60861 476 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 DCTN3O75935 186 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ATP5HO75947 161 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 POLR2MP0CAP2 368 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 LMNB1P20700 586 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 SP100P23497 879 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 TUBP50607 506 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 PABPC4Q13310 644 aaKnown RBP eCLIP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 TTLL12Q14166 644 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 PHLDB3Q6NSJ2 640 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ZNF746Q6NUN9 644 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CCDC62Q6P9F0 684 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 AMIGO3Q86WK7 504 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 RTKN2Q8IZC4 609 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ANKRD35Q8N283 1001 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 RFFLQ8WZ73 363 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 SMC6Q96SB8 1091 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ARHGEF3Q9NR81 526 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 MRPL11Q9Y3B7 192 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 SIPA1L3O60292 1781 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 PITPNM2Q9BZ72 1349 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 RBAK-RBAKDNI3L0D1 243 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 O00370 1275 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 MEIS1O00470 390 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CAPN9O14815 690 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 GYG2O15488 501 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ONECUT3O60422 494 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 HOXA13P31271 388 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CHRNA3P32297 505 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 VHLP40337 213 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CETN2P41208 172 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 STAT2P52630 851 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 INHBEP58166 350 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 UBXN2AP68543 259 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 SP4Q02446 784 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 TNFAIP1Q13829 316 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 SGO2Q562F6 1265 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 GALNT15Q8N3T1 639 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ZNF513Q8N8E2 541 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ZNF384Q8TF68 577 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 DCAF4Q8WV16 495 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ITFG2Q969R8 447 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 DDX27Q96GQ7 796 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 C9orf72Q96LT7 481 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CEP63Q96MT8 703 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 NUDT12Q9BQG2 462 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 CDC42EP4Q9H3Q1 356 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 VPS37BQ9H9H4 285 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 TMEM59LQ9UK28 342 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 SH3BP1Q9Y3L3 701 aa7.91□□□□□ -1.14
SYNPO2-203ENST00000434046 ARHGEF35A5YM69 484 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 PHF2O75151 1096 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 NUDT17P0C025 328 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 TROVE2P10155 538 aaKnown RBP eCLIP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 MYBP10242 640 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 DLATP10515 647 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 MYCLP12524 364 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 ALAS1P13196 640 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms