RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SLC25A43Q8WUT9 341 aaPredicted RBP4.65□□□□□ -1.66
CLK1-204ENST00000432425 NEU4Q8WWR8 484 aaPredicted RBP4.65□□□□□ -1.66
CLK1-204ENST00000432425 FATE1Q969F0 183 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 CLIP3Q96DZ5 547 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 ACE2Q9BYF1 805 aaPredicted RBP4.65□□□□□ -1.66
CLK1-204ENST00000432425 NRDE2Q9H7Z3 1164 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 IFT122Q9HBG6 1241 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 MCM8Q9UJA3 840 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 ING1Q9UK53 422 aaPredicted RBP4.65□□□□□ -1.66
CLK1-204ENST00000432425 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.65□□□□□ -1.66
CLK1-204ENST00000432425 SORCS3Q9UPU3 1222 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 ZMYM3Q14202 1370 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 B5MCH6 92 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 TRIM24O15164 1050 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 PRKD3O94806 890 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 TGFB2P61812 414 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 GJC2Q5T442 439 aaPredicted RBP4.64□□□□□ -1.67
CLK1-204ENST00000432425 ZNF276Q8N554 614 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 CPT1CQ8TCG5 803 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 COG1Q8WTW3 980 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 TSPEARQ8WU66 669 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 RIN2Q8WYP3 895 aaPredicted RBP4.64□□□□□ -1.67
CLK1-204ENST00000432425 ORAI2Q96SN7 254 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 CPEB1Q9BZB8 566 aaKnown RBP4.64□□□□□ -1.67
CLK1-204ENST00000432425 TRIM8Q9BZR9 551 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 SPC25Q9HBM1 224 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 SPON1Q9HCB6 807 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 DNAJC28Q9NX36 388 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 TRPS1Q9UHF7 1281 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 PPFIA4O75335 1185 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 SCAF4O95104 1147 aaKnown RBP4.64□□□□□ -1.67
CLK1-204ENST00000432425 ECHS1P30084 290 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 ADSLP30566 484 aaPredicted RBP4.64□□□□□ -1.67
CLK1-204ENST00000432425 SRSF2Q01130 221 aaKnown RBP4.64□□□□□ -1.67
CLK1-204ENST00000432425 MST1LQ2TV78 715 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 ANO4Q32M45 955 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 MUM1L1Q5H9M0 696 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 LILRA3Q8N6C8 439 aaPredicted RBP4.64□□□□□ -1.67
CLK1-204ENST00000432425 AMER2Q8N7J2 671 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 GPR156Q8NFN8 814 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 NDC1Q9BTX1 674 aa4.64□□□□□ -1.67
CLK1-204ENST00000432425 GRXCR1A8MXD5 290 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 PTPN7P35236 360 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 SLC5A3P53794 718 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 ADRM1Q16186 407 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 PRAMEF14Q5SWL7 426 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 RNF187Q5TA31 235 aaPredicted RBP4.63□□□□□ -1.67
CLK1-204ENST00000432425 KCNK18Q7Z418 384 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 HAS1Q92839 578 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 UHRF1Q96T88 793 aaPredicted RBP4.63□□□□□ -1.67
CLK1-204ENST00000432425 ADI1Q9BV57 179 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 GREM2Q9H772 168 aa4.63□□□□□ -1.67
CLK1-204ENST00000432425 CCM2LQ9NUG4 571 aaPredicted RBP4.63□□□□□ -1.67
CLK1-204ENST00000432425 MGAT1P26572 445 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 APOBEC3AP31941 199 aaPredicted RBP4.62□□□□□ -1.67
CLK1-204ENST00000432425 GPR3P46089 330 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 FLT3LGP49771 235 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 PER3P56645 1201 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 EFCAB12Q6NXP0 572 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 GPRIN1Q7Z2K8 1008 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 AMOTL1Q8IY63 956 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 OR7D4Q8NG98 312 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 OR10H5Q8NGA6 315 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 LARP4BQ92615 738 aaKnown RBP4.62□□□□□ -1.67
CLK1-204ENST00000432425 DCLRE1CQ96SD1 692 aaKnown RBP4.62□□□□□ -1.67
CLK1-204ENST00000432425 FAM126AQ9BYI3 521 aaPredicted RBP4.62□□□□□ -1.67
CLK1-204ENST00000432425 KCNH6Q9H252 994 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 BCO1Q9HAY6 547 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 RBM12Q9NTZ6 932 aaKnown RBP4.62□□□□□ -1.67
CLK1-204ENST00000432425 GPRC5BQ9NZH0 403 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 POGKQ9P215 609 aa4.62□□□□□ -1.67
CLK1-204ENST00000432425 MBNL2Q5VZF2 373 aaKnown RBP4.61□□□□□ -1.67
CLK1-204ENST00000432425 DRICH1Q6PGQ1 229 aaPredicted RBP4.61□□□□□ -1.67
CLK1-204ENST00000432425 REPS2Q8NFH8 660 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 ZFP28Q8NHY6 868 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 TFAP2CQ92754 450 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 LENG9Q96B70 501 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 CEP95Q96GE4 821 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 TRPM5Q9NZQ8 1165 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 FZD1Q9UP38 647 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 WDR33Q9C0J8 1336 aaKnown RBP4.61□□□□□ -1.67
CLK1-204ENST00000432425 TBKBP1A7MCY6 615 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 ADCY6O43306 1168 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 RBP3P10745 1247 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 OSMP13725 252 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 POU3F3P20264 500 aaPredicted RBP4.61□□□□□ -1.67
CLK1-204ENST00000432425 ERVK-21P61565 698 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 MALLQ13021 153 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 BMT2Q1RMZ1 405 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 FAM47AQ5JRC9 791 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 MFSD14BQ5SR56 506 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 LY6G5CQ5SRR4 150 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 ANKS6Q68DC2 871 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 TRMT2AQ8IZ69 625 aaKnown RBP4.61□□□□□ -1.67
CLK1-204ENST00000432425 RNF169Q8NCN4 708 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 SLC46A2Q9BY10 475 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 SLC5A4Q9NY91 659 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 SCOCQ9UIL1 159 aa4.61□□□□□ -1.67
CLK1-204ENST00000432425 DIRC3C9JPN6 131 aa4.6□□□□□ -1.67
CLK1-204ENST00000432425 PJA2O43164 708 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms