RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 XBP1P17861 261 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 RPS6KB1P23443 525 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 KLRC2P26717 231 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 HOXA11P31270 313 aaPredicted RBP9.26□□□□□ -0.93
CDH13-203ENST00000431540 SSRP1Q08945 709 aaKnown RBP9.26□□□□□ -0.93
CDH13-203ENST00000431540 EPHA7Q15375 998 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 RARS2Q5T160 578 aaKnown RBP9.26□□□□□ -0.93
CDH13-203ENST00000431540 KIAA0319Q5VV43 1072 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 ANO5Q75V66 913 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 RAB11FIP4Q86YS3 637 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 RHPN2Q8IUC4 686 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 CCDC105Q8IYK2 499 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 SLFN12Q8IYM2 578 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 TMEM105Q8N8V8 129 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 ETNPPLQ8TBG4 499 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 PSPC1Q8WXF1 523 aaKnown RBP9.26□□□□□ -0.93
CDH13-203ENST00000431540 RPS6KC1Q96S38 1066 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 RSAD1Q9HA92 442 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 KCNK12Q9HB15 430 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 WDR6Q9NNW5 1121 aaKnown RBP9.26□□□□□ -0.93
CDH13-203ENST00000431540 CHST7Q9NS84 486 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 PIN4Q9Y237 131 aaKnown RBP9.26□□□□□ -0.93
CDH13-203ENST00000431540 GIT1Q9Y2X7 761 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 COL4A3BPQ9Y5P4 624 aa9.26□□□□□ -0.93
CDH13-203ENST00000431540 EP300Q09472 2414 aaPredicted RBP9.25□□□□□ -0.93
CDH13-203ENST00000431540 TRIP11Q15643 1979 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 CACNA1AO00555 2505 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 CDKL5O76039 1030 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 CSPG5O95196 566 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 LYPLA2O95372 231 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 BAG4O95429 457 aaKnown RBP9.25□□□□□ -0.93
CDH13-203ENST00000431540 POU2F2P09086 479 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 CNPP09543 421 aaKnown RBP9.25□□□□□ -0.93
CDH13-203ENST00000431540 EPCAMP16422 314 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 MAGEA9P43362 315 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 DSG1Q02413 1049 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
CDH13-203ENST00000431540 MTERF2Q49AM1 385 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 PDXDC1Q6P996 788 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 RSPO2Q6UXX9 243 aaPredicted RBP9.25□□□□□ -0.93
CDH13-203ENST00000431540 AGMOQ6ZNB7 445 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 RUFY3Q7L099 469 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 RNF169Q8NCN4 708 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 PRPF31Q8WWY3 499 aaKnown RBP9.25□□□□□ -0.93
CDH13-203ENST00000431540 SHDQ96IW2 340 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 COLEC11Q9BWP8 271 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 SLC26A6Q9BXS9 759 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 OSBPL6Q9BZF3 934 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 ZSWIM4Q9H7M6 989 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 KCNMB3Q9NPA1 279 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 TSHZ2Q9NRE2 1034 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 SNX14Q9Y5W7 946 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 DOCK6Q96HP0 2047 aa9.25□□□□□ -0.93
CDH13-203ENST00000431540 NT5C1B-RDH14C9J2C7 533 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 DPYSL4O14531 572 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 NRP1O14786 923 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 CPLX1O14810 134 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 URODP06132 367 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 SRFP11831 508 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 NPR3P17342 541 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 SDHBP21912 280 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 SLC11A1P49279 550 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 PTENP60484 403 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 DSC1Q08554 894 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 TFDP1Q14186 410 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 UGCGQ16739 394 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 UVSSAQ2YD98 709 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 NOTUMQ6P988 496 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 ZC3H14Q6PJT7 736 aaKnown RBP9.24□□□□□ -0.93
CDH13-203ENST00000431540 FERMT3Q86UX7 667 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 COLGALT2Q8IYK4 626 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 GPR161Q8N6U8 529 aaKnown RBP9.24□□□□□ -0.93
CDH13-203ENST00000431540 DTWD2Q8NBA8 298 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 PHKBQ93100 1093 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 PRIMPOLQ96LW4 560 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 TCEANC2Q96MN5 208 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 JAKMIP1Q96N16 626 aaKnown RBP9.24□□□□□ -0.93
CDH13-203ENST00000431540 PPP1R16BQ96T49 567 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 HERC2P3Q9BVR0 1158 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 SLC2A4RGQ9NR83 387 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 ANKEF1Q9NU02 776 aa9.24□□□□□ -0.93
CDH13-203ENST00000431540 DDX25Q9UHL0 483 aaKnown RBP9.24□□□□□ -0.93
CDH13-203ENST00000431540 NAP1L2Q9ULW6 460 aaPredicted RBP9.24□□□□□ -0.93
CDH13-203ENST00000431540 MYH15Q9Y2K3 1946 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 CCDC195A0A1B0GUA6 201 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 FAM181BA6NEQ2 426 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 ANHXE9PGG2 379 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 DDHD2O94830 711 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 ERLIN2O94905 339 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 GLUD1P00367 558 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 PDGFBP01127 241 aaPredicted RBP9.23□□□□□ -0.93
CDH13-203ENST00000431540 AVPP01185 164 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 HNRNPA1P09651 372 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDH13-203ENST00000431540 ITGA4P13612 1032 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 IBSPP21815 317 aaPredicted RBP9.23□□□□□ -0.93
CDH13-203ENST00000431540 HOXA9P31269 272 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 PBX3P40426 434 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 GLUD2P49448 558 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 LAMTOR4Q0VGL1 99 aa9.23□□□□□ -0.93
CDH13-203ENST00000431540 ELAVL2Q12926 359 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms