RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TTYH1Q9H313 450 aaPredicted RBP27.55■■■□□ 2
CPNE1-212ENST00000430570 SLC28A3Q9HAS3 691 aa27.55■■■□□ 2
CPNE1-212ENST00000430570 SLC39A2Q9NP94 309 aa27.55■■■□□ 2
CPNE1-212ENST00000430570 SNTG2Q9NY99 539 aa27.55■■■□□ 2
CPNE1-212ENST00000430570 HCSTQ9UBK5 93 aa27.55■■■□□ 2
CPNE1-212ENST00000430570 TISP43B9A030 160 aa27.54■■■□□ 2
CPNE1-212ENST00000430570 TOM1L1O75674 476 aa27.54■■■□□ 2
CPNE1-212ENST00000430570 ABCD1P33897 745 aa27.54■■■□□ 2
CPNE1-212ENST00000430570 LIG4P49917 911 aa27.54■■■□□ 2
CPNE1-212ENST00000430570 AFF1P51825 1210 aaKnown RBP27.54■■■□□ 2
CPNE1-212ENST00000430570 DCAF4L1Q3SXM0 396 aa27.54■■■□□ 2
CPNE1-212ENST00000430570 PPP2R2DQ66LE6 453 aa27.54■■■□□ 2
CPNE1-212ENST00000430570 CMTR2Q8IYT2 770 aaKnown RBP27.54■■■□□ 2
CPNE1-212ENST00000430570 CEP120Q8N960 986 aa27.54■■■□□ 2
CPNE1-212ENST00000430570 ERCC4Q92889 916 aaPredicted RBP27.54■■■□□ 2
CPNE1-212ENST00000430570 LAMA2P24043 3122 aaKnown RBP27.54■■■□□ 2
CPNE1-212ENST00000430570 HNRNPDLO14979 420 aaKnown RBP27.53■■■□□ 2
CPNE1-212ENST00000430570 HOXA2O43364 376 aa27.53■■■□□ 2
CPNE1-212ENST00000430570 KINO60870 393 aaKnown RBP27.53■■■□□ 2
CPNE1-212ENST00000430570 STK4Q13043 487 aa27.53■■■□□ 2
CPNE1-212ENST00000430570 LRRC55Q6ZSA7 311 aa27.53■■■□□ 2
CPNE1-212ENST00000430570 EPM2AIP1Q7L775 607 aaPredicted RBP27.53■■■□□ 2
CPNE1-212ENST00000430570 FIBCD1Q8N539 461 aa27.53■■■□□ 2
CPNE1-212ENST00000430570 ACCSQ96QU6 501 aa27.53■■■□□ 2
CPNE1-212ENST00000430570 RSAD1Q9HA92 442 aa27.53■■■□□ 2
CPNE1-212ENST00000430570 EXOC1Q9NV70 894 aa27.53■■■□□ 2
CPNE1-212ENST00000430570 ANKFY1Q9P2R3 1169 aa27.53■■■□□ 2
CPNE1-212ENST00000430570 MRPL42Q9Y6G3 142 aaKnown RBP27.53■■■□□ 2
CPNE1-212ENST00000430570 LINC00271P0C7V0 271 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 HARSP12081 509 aaKnown RBP27.52■■■□□ 2
CPNE1-212ENST00000430570 HOXD13P35453 343 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 ALCAMQ13740 583 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 TMEM192Q8IY95 271 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 ABI1Q8IZP0 508 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 ZNF507Q8TCN5 953 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 CCDC34Q96HJ3 373 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 ZNF576Q9H609 170 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 CERS4Q9HA82 394 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 MIOSQ9NXC5 875 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 PARP2Q9UGN5 583 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 INPP5FQ9Y2H2 1132 aa27.52■■■□□ 2
CPNE1-212ENST00000430570 CLDN3O15551 220 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 MCF2P10911 925 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 MCL1Q07820 350 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 KIAA0895Q8NCT3 520 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 SCFD1Q8WVM8 642 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 GAD1Q99259 594 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 CXCL16Q9H2A7 254 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 TYW1Q9NV66 732 aaKnown RBP27.51■■□□□ 1.99
CPNE1-212ENST00000430570 KLK14Q9P0G3 267 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 GDAQ9Y2T3 454 aa27.51■■□□□ 1.99
CPNE1-212ENST00000430570 EIF3DO15371 548 aaKnown RBP eCLIP27.5■■□□□ 1.99
CPNE1-212ENST00000430570 MATR3P43243 847 aaKnown RBP eCLIP27.5■■□□□ 1.99
CPNE1-212ENST00000430570 OSTNP61366 133 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 SEZ6Q53EL9 994 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 GLB1LQ6UWU2 654 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 Q7L0L9 218 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 ELOA2Q8IYF1 753 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-212ENST00000430570 THNSL1Q8IYQ7 743 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 C17orf80Q9BSJ5 609 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 SEMA6BQ9H3T3 888 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 EXOC7Q9UPT5 735 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 GIT1Q9Y2X7 761 aa27.5■■□□□ 1.99
CPNE1-212ENST00000430570 RECQL4O94761 1208 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 RHOBTB3O94955 611 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 MLH1P40692 756 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 GRM5P41594 1212 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 PSMD2Q13200 908 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 NOLC1Q14978 699 aaKnown RBP eCLIP27.49■■□□□ 1.993e-8■□□□□ 8.2
CPNE1-212ENST00000430570 NOMO2Q5JPE7 1267 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 ZNF697Q5TEC3 545 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 GPR153Q6NV75 609 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 STXBP4Q6ZWJ1 553 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 APBB1IPQ7Z5R6 666 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-212ENST00000430570 HACE1Q8IYU2 909 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 ZFP42Q96MM3 310 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 FAM161BQ96MY7 647 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 CWH43Q9H720 699 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 UBN1Q9NPG3 1134 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 PCDHA5Q9Y5H7 936 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 STYXL1Q9Y6J8 313 aa27.49■■□□□ 1.99
CPNE1-212ENST00000430570 TMEM265A0A087WTH1 108 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 ARL5CA6NH57 179 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 ADSSP30520 456 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 ERVK-21P61565 698 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 KCNB1Q14721 858 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 NELFCDQ8IXH7 590 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 SYCP3Q8IZU3 236 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 GSTCDQ8NEC7 633 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 TMEM206Q9H813 350 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 TBC1D13Q9NVG8 400 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 MTUS1Q9ULD2 1270 aa27.48■■□□□ 1.99
CPNE1-212ENST00000430570 ZMYM2Q9UBW7 1377 aa27.47■■□□□ 1.99
CPNE1-212ENST00000430570 A0A0B4J269 797 aa27.47■■□□□ 1.99
CPNE1-212ENST00000430570 ZBTB41Q5SVQ8 909 aa27.47■■□□□ 1.99
CPNE1-212ENST00000430570 SPATA20Q8TB22 786 aa27.47■■□□□ 1.99
CPNE1-212ENST00000430570 CLP1Q92989 425 aaKnown RBP27.47■■□□□ 1.99
CPNE1-212ENST00000430570 CCDC47Q96A33 483 aaKnown RBP27.47■■□□□ 1.99
CPNE1-212ENST00000430570 TGS1Q96RS0 853 aaKnown RBP27.47■■□□□ 1.99
CPNE1-212ENST00000430570 EPOPA6NHQ4 379 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms