RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CA8P35219 290 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 LONP1P36776 959 aaKnown RBP18.71■□□□□ 0.59
UBE3D-204ENST00000430071 MLH1P40692 756 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 SCNN1GP51170 649 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 KRT85P78386 507 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 CDCA2Q69YH5 1023 aaPredicted RBP18.71■□□□□ 0.59
UBE3D-204ENST00000430071 KANK3Q6NY19 840 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 KRI1Q8N9T8 703 aaKnown RBP18.71■□□□□ 0.59
UBE3D-204ENST00000430071 GSTCDQ8NEC7 633 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 MCPH1Q8NEM0 835 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 URGCPQ8TCY9 931 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 AK8Q96MA6 479 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 S1PR5Q9H228 398 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 NGRNQ9NPE2 291 aaKnown RBP18.71■□□□□ 0.59
UBE3D-204ENST00000430071 KLK14Q9P0G3 267 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
UBE3D-204ENST00000430071 NRP1O14786 923 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 LIG1P18858 919 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 SMC1AQ14683 1233 aaKnown RBP18.7■□□□□ 0.58
UBE3D-204ENST00000430071 KRT79Q5XKE5 535 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 EEF1DP3Q658K8 133 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 HAUS3Q68CZ6 603 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 ANKRD54Q6NXT1 300 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 USP49Q70CQ1 688 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 TAS1R1Q7RTX1 841 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 DDX53Q86TM3 631 aaKnown RBP18.7■□□□□ 0.58
UBE3D-204ENST00000430071 COLGALT2Q8IYK4 626 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 KCNG4Q8TDN1 519 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 LEO1Q8WVC0 666 aaPredicted RBP18.7■□□□□ 0.58
UBE3D-204ENST00000430071 RABGGTAQ92696 567 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 CDCA3Q99618 268 aaPredicted RBP18.7■□□□□ 0.58
UBE3D-204ENST00000430071 LRFN3Q9BTN0 628 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 FZD8Q9H461 694 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 MARCH5Q9NX47 278 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 PRKAG3Q9UGI9 489 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 CNTNAP2Q9UHC6 1331 aa18.7■□□□□ 0.58
UBE3D-204ENST00000430071 PDCD11Q14690 1871 aaKnown RBP18.7■□□□□ 0.58
UBE3D-204ENST00000430071 A0A1B0GUA9 196 aa18.69■□□□□ 0.58
UBE3D-204ENST00000430071 SSBP05455 408 aaKnown RBP eCLIP18.69■□□□□ 0.58
UBE3D-204ENST00000430071 AXDND1Q5T1B0 1012 aaPredicted RBP18.69■□□□□ 0.58
UBE3D-204ENST00000430071 TMEM184AQ6ZMB5 413 aa18.69■□□□□ 0.58
UBE3D-204ENST00000430071 EPSTI1Q96J88 318 aa18.69■□□□□ 0.58
UBE3D-204ENST00000430071 CCDC113Q9H0I3 377 aa18.69■□□□□ 0.58
UBE3D-204ENST00000430071 FAM50BQ9Y247 325 aa18.69■□□□□ 0.58
UBE3D-204ENST00000430071 PRG3Q9Y2Y8 225 aaPredicted RBP18.69■□□□□ 0.58
UBE3D-204ENST00000430071 HCFC2Q9Y5Z7 792 aa18.69■□□□□ 0.58
UBE3D-204ENST00000430071 DENND4AQ7Z401 1863 aa18.69■□□□□ 0.58
UBE3D-204ENST00000430071 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-204ENST00000430071 INPPL1O15357 1258 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 CTSAP10619 480 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 MUTP22033 750 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PCBP1Q15365 356 aaKnown RBP eCLIP18.68■□□□□ 0.58
UBE3D-204ENST00000430071 SLC27A1Q6PCB7 646 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 CABP7Q86V35 215 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 DAW1Q8N136 415 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 C12orf76Q8N812 135 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-204ENST00000430071 CNNM3Q8NE01 707 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 SUSD6Q92537 303 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 CCDC51Q96ER9 411 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 SPATA32Q96LK8 384 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PNMA5Q96PV4 448 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PLIN2Q99541 437 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 RUSC1Q9BVN2 902 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PDZD7Q9H5P4 517 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 GDPD2Q9HCC8 539 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PCDHA7Q9UN72 937 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 FAN1Q9Y2M0 1017 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 STK24Q9Y6E0 443 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 ZNF318Q5VUA4 2279 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 DOCK8Q8NF50 2099 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 CUTAO60888 179 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 ALDH2P05091 517 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PRKCBP05771 671 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 WEE2P0C1S8 567 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 EPCAMP16422 314 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 UBA7P41226 1012 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 ME1P48163 572 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 DSC1Q08554 894 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 FAM187BQ17R55 369 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 HYIQ5T013 277 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 FAM193BQ96PV7 902 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-204ENST00000430071 TRIM6Q9C030 488 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PRMT7Q9NVM4 692 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-204ENST00000430071 PARP2Q9UGN5 583 aa18.68■□□□□ 0.58
UBE3D-204ENST00000430071 NAMPTP43490 491 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 OR1G1P47890 313 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 NCBP1Q09161 790 aaKnown RBP18.67■□□□□ 0.58
UBE3D-204ENST00000430071 MAPK7Q13164 816 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 PTPN14Q15678 1187 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 ZRSR1Q15695 479 aaKnown RBP18.67■□□□□ 0.58
UBE3D-204ENST00000430071 TMEM119Q4V9L6 283 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 NT5DC1Q5TFE4 455 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 ZBTB8OSQ8IWT0 167 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 LRRC15Q8TF66 581 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 RSPH1Q8WYR4 309 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 PAAF1Q9BRP4 392 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 TMEM175Q9BSA9 504 aa18.67■□□□□ 0.58
UBE3D-204ENST00000430071 C1QTNF1Q9BXJ1 281 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms