RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 COQ6Q9Y2Z9 468 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 UTP11Q9Y3A2 253 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 STARD13Q9Y3M8 1113 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZNF609O15014 1411 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 SOS2Q07890 1332 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 SOBPA7XYQ1 873 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 F8W8V4 182 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZNF862O60290 1169 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC22O60826 627 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 FGFR1OPO95684 399 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 APOEP02649 317 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 MXI1P50539 228 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 CABP4P57796 275 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 COG7P83436 770 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 GRIN1Q05586 938 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 NR1D2Q14995 579 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 ANKDD1AQ495B1 522 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 RILPL1Q5EBL4 403 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 FAM47EQ6ZV65 393 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 CYB5R4Q7L1T6 521 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 TMC4Q7Z404 712 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 GRAMD2AQ8IUY3 354 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 ALLCQ8N6M5 410 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 PRPF18Q99633 342 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 VTA1Q9NP79 307 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 STRN4Q9NRL3 753 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 SATB2Q9UPW6 733 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 TNS2Q63HR2 1409 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 TLDC2A0PJX2 215 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 GOLGA8BA8MQT2 603 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 PIK3CDO00329 1044 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 UBL4AP11441 157 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 EIF4A3P38919 411 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 LIFRP42702 1097 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 XIAPP98170 497 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 FOXO4P98177 505 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 ASPHQ12797 758 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 MYLK3Q32MK0 819 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 RFWD3Q6PCD5 774 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 PLBD2Q8NHP8 589 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 RIN3Q8TB24 985 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 PRPF31Q8WWY3 499 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 ARHGEF2Q92974 986 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZFRQ96KR1 1074 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 BIRC8Q96P09 236 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 ERGIC2Q96RQ1 377 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 TGS1Q96RS0 853 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 CADM1Q9BY67 442 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 CRNKL1Q9BZJ0 848 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 UNKQ9C0B0 810 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 ANKRD2Q9GZV1 360 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 PARVGQ9HBI0 331 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 KLF18A0A0U1RQI7 1052 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 TMEM114B3SHH9 223 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 RBAK-RBAKDNI3L0D1 243 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 KMOO15229 486 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 TEX28O15482 410 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZWINTO95229 277 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 PPARGP37231 505 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 AFMP43652 599 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 TFCP2Q12800 502 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 TRIM29Q14134 588 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 SEPT6Q14141 434 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 NKX1-1Q15270 411 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 NAB2Q15742 525 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 TNNI3KQ59H18 835 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZNF658Q5TYW1 1059 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 NOSTRINQ8IVI9 506 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 LSMEM2Q8N112 164 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 MIGA1Q8NAN2 632 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 BTBD10Q9BSF8 475 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 PIH1D3Q9NQM4 214 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 NDUFB9Q9Y6M9 179 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 FPGT-TNNI3KV9GXZ4 949 aa9.44□□□□□ -0.9
CDC42BPA-206ENST00000429440 A0A087WZG4 1122 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 SSU72P8A0A1W2PR75 194 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 TMEM120BA0PK00 339 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CLASP2O75122 1294 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CNOT3O75175 753 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 PALMO75781 387 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 BAIAP3O94812 1187 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 TFAP2AP05549 437 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 PABPC1P11940 636 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 GNA11P29992 359 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 ATP5DP30049 168 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 SERPINB6P35237 376 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 ACADSBP45954 432 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 GPC3P51654 580 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CDC16Q13042 620 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 AUHQ13825 339 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 RASGRF1Q13972 1273 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CYTH1Q15438 398 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 ASTE1Q2TB18 679 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 BOLA3Q53S33 107 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 WDR45BQ5MNZ6 344 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 MAP3K21Q5TCX8 1036 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 ADGRG6Q86SQ4 1221 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms