RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 ADCYAP1R1P41586 468 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 DDX53Q86TM3 631 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 SUDS3Q9H7L9 328 aaPredicted RBP18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 LRRC53A6NM62 1247 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 C10orf76Q5T2E6 689 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 SENP7Q9BQF6 1050 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 DYRK4Q9NR20 520 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 FAM49BQ9NUQ9 324 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 CLGNO14967 610 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 CSDE1O75534 798 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 GARSP41250 739 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 ADCY1Q08828 1119 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 SV2CQ496J9 727 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 PCNX4Q63HM2 1172 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 PRDM10Q9NQV6 1147 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 CDK17Q00537 523 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 EFHC2Q5JST6 749 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 CCDC170Q8IYT3 715 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 HPS5Q9UPZ3 1129 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 CAPN2P17655 700 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 ELF2Q15723 593 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 FSCN1Q16658 493 aaKnown RBP18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 VSTM4Q8IW00 320 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 RHOT2Q8IXI1 618 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 SRGAP2O75044 1071 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 PCSK1P29120 753 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 ALDH5A1P51649 535 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 ANKRD40Q6AI12 368 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 PHLPP1O60346 1717 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 RGS16O15492 202 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 GAS2O43903 313 aaKnown RBP18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 DNAJB2P25686 324 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 SREBF1P36956 1147 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 PRAMEF19Q5SWL8 479 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 TMC7Q7Z402 723 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 ATP6V1E2Q96A05 226 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 CACYBPQ9HB71 228 aaKnown RBP18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 POC1B-GALNT4F8VUJ3 575 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 NDUFA10O95299 355 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 CRY2Q49AN0 593 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 ENOSF1Q7L5Y1 443 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 TADA2BQ86TJ2 420 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 ABI2Q9NYB9 513 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 SLURP2P0DP57 97 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 CYP11B2P19099 503 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 FKBP1BP68106 108 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 GUCY2DQ02846 1103 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 PGM5Q15124 567 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 KIAA1755Q5JYT7 1200 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 USP49Q70CQ1 688 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 HEMGNQ9BXL5 484 aa18.23■□□□□ 0.51
SMARCA4-203ENST00000429416 IL18RAPO95256 599 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 ETF1P62495 437 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 DNAJB3Q8WWF6 145 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 PDGFDQ9GZP0 370 aaPredicted RBP18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 DHX35Q9H5Z1 703 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 SP110Q9HB58 689 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 ECEL1O95672 775 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 SGSM1Q2NKQ1 1148 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 VTA1Q9NP79 307 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 HOXA2O43364 376 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 GHRP10912 638 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 FDPSP14324 419 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 INSRRP14616 1297 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 CLCN1P35523 988 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 RWDD2BP57060 319 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 RAD51Q06609 339 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 CCDC13Q8IYE1 715 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 IFT43Q96FT9 208 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 CAPNS2Q96L46 248 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 PGRMC1O00264 195 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 INHBAP08476 426 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 GPC5P78333 572 aa18.22■□□□□ 0.51
SMARCA4-203ENST00000429416 COL3A1P02461 1466 aaPredicted RBP18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 CYP26A1O43174 497 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 SART1O43290 800 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 TRIM56Q9BRZ2 755 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 FSD1LQ9BXM9 530 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 A1CFQ9NQ94 594 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 CLTAP09496 248 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 SAMD3Q8N6K7 520 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 ASIC4Q96FT7 647 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 TRIM62Q9BVG3 475 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.21■□□□□ 0.512e-8■■■□□ 16.1
SMARCA4-203ENST00000429416 RSPH14Q9UHP6 348 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 SH3BP1Q9Y3L3 701 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 SOX5P35711 763 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 DCAF4L1Q3SXM0 396 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 PGK1P00558 417 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 IGFBP4P22692 258 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 COG7P83436 770 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 ERCC6LQ2NKX8 1250 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 FRMD5Q7Z6J6 570 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 VGLL2Q8N8G2 317 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 HASPINQ8TF76 798 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 DAAM1Q9Y4D1 1078 aa18.21■□□□□ 0.51
SMARCA4-203ENST00000429416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms