RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 H3BQV1 296 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 ZBTB39O15060 712 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 DKC1O60832 514 aaKnown RBP eCLIP12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 MAFO75444 373 aaPredicted RBP12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 SPATA31C1P0DKV0 1188 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 GBP2P32456 591 aaPredicted RBP12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 PHKA2P46019 1235 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 RAB27AP51159 221 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 CYP4A11Q02928 519 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 PTGDRQ13258 359 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 DRP2Q13474 957 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 CTTNQ14247 550 aaKnown RBP12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 MTERF2Q49AM1 385 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 NOMO2Q5JPE7 1267 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 MCTP1Q6DN14 999 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 ZNF598Q86UK7 904 aaKnown RBP12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 CCDC105Q8IYK2 499 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 KRI1Q8N9T8 703 aaKnown RBP12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 LPPQ93052 612 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 PGBD4Q96DM1 585 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 SH2D3AQ9BRG2 576 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 PPME1Q9Y570 386 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 IRAK3Q9Y616 596 aa12.05□□□□□ -0.48
APOBEC3C-202ENST00000428892 LAD1O00515 517 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 CSDE1O75534 798 aaKnown RBP12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 PDCP20941 246 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 SYT1P21579 422 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 YWHABP31946 246 aaKnown RBP12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 PRPHP41219 470 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 NPEPPSP55786 919 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 IL17AQ16552 155 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 CATSPER4Q7RTX7 472 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 GPR149Q86SP6 731 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 IGSF22Q8N9C0 903 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 DTWD2Q8NBA8 298 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 STAMQ92783 540 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 POLR3CQ9BUI4 534 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 DHX33Q9H6R0 707 aaKnown RBP12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 TUFT1Q9NNX1 390 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 MRPL17Q9NRX2 175 aaKnown RBP12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 TBC1D13Q9NVG8 400 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 IGSF9Q9P2J2 1179 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 DPP7Q9UHL4 492 aa12.04□□□□□ -0.48
APOBEC3C-202ENST00000428892 RIF1Q5UIP0 2472 aaKnown RBP12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 A0A087WZ62 844 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 C2CD2LO14523 706 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 MED24O75448 989 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 URODP06132 367 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 CFHP08603 1231 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 FOXK1P85037 733 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 ZC3H14Q6PJT7 736 aaKnown RBP12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 C15orf39Q6ZRI6 1047 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 BRAPQ7Z569 592 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 ZNF410Q86VK4 478 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 CATSPER3Q86XQ3 398 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 RHPN2Q8IUC4 686 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 TPH2Q8IWU9 490 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 SLC22A17Q8WUG5 538 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 CEP170P1Q96L14 293 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 NLRP4Q96MN2 994 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 FDXACB1Q9BRP7 624 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 KCNK12Q9HB15 430 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 ANKEF1Q9NU02 776 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 FAM105AQ9NUU6 356 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 MTMR6Q9Y217 621 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 FANCMQ8IYD8 2048 aa12.03□□□□□ -0.48
APOBEC3C-202ENST00000428892 PI15O43692 258 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 LMNAP02545 664 aaKnown RBP12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 ADH1AP07327 375 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 GALTP07902 379 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 XRCC6P12956 609 aaKnown RBP eCLIP12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 RPA1P27694 616 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 RFC5P40937 340 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 SLC11A1P49279 550 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 RARRES1P49788 294 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 CLCN4P51793 760 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 RESTQ13127 1097 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 PDIA5Q14554 519 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 OTUD6AQ7L8S5 288 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 KLHL5Q96PQ7 755 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 JPH2Q9BR39 696 aaPredicted RBP12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 SEMA4AQ9H3S1 761 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 PIDD1Q9HB75 910 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 XPNPEP1Q9NQW7 623 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 MAN1C1Q9NR34 630 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 SUCLA2Q9P2R7 463 aaPredicted RBP12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 DNAJB4Q9UDY4 337 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 CA14Q9ULX7 337 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 SSX2IPQ9Y2D8 614 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 FAN1Q9Y2M0 1017 aa12.02□□□□□ -0.49
APOBEC3C-202ENST00000428892 DOCK8Q8NF50 2099 aa12.01□□□□□ -0.49
APOBEC3C-202ENST00000428892 VPS37CA5D8V6 355 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3C-202ENST00000428892 DPYSL4O14531 572 aa12.01□□□□□ -0.49
APOBEC3C-202ENST00000428892 NPR3P17342 541 aa12.01□□□□□ -0.49
APOBEC3C-202ENST00000428892 MUTP22033 750 aa12.01□□□□□ -0.49
APOBEC3C-202ENST00000428892 DSG2Q14126 1118 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms