RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CDCA2Q69YH5 1023 aaPredicted RBP17.21■□□□□ 0.35
SEC13-210ENST00000428626 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 GPR149Q86SP6 731 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 FBXO18Q8NFZ0 1043 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 CCDC43Q96MW1 224 aaKnown RBP17.21■□□□□ 0.35
SEC13-210ENST00000428626 RPS6KC1Q96S38 1066 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
SEC13-210ENST00000428626 GPR62Q9BZJ7 368 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 FZD8Q9H461 694 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 SFXN1Q9H9B4 322 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 MRPL17Q9NRX2 175 aaKnown RBP17.21■□□□□ 0.35
SEC13-210ENST00000428626 LIMD1Q9UGP4 676 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 DBR1Q9UK59 544 aaKnown RBP17.21■□□□□ 0.35
SEC13-210ENST00000428626 GIT1Q9Y2X7 761 aa17.21■□□□□ 0.35
SEC13-210ENST00000428626 OR52Z1P0C646 297 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 MRE11P49959 708 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 SLC27A1Q6PCB7 646 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 ZBTB33Q86T24 672 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 PPFIBP1Q86W92 1011 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 PAAF1Q9BRP4 392 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 LLPHQ9BRT6 129 aaKnown RBP17.2■□□□□ 0.34
SEC13-210ENST00000428626 EMILIN2Q9BXX0 1053 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 FOXP1Q9H334 677 aaPredicted RBP17.2■□□□□ 0.34
SEC13-210ENST00000428626 CHST7Q9NS84 486 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 SORCS3Q9UPU3 1222 aa17.2■□□□□ 0.34
SEC13-210ENST00000428626 N4BP1O75113 896 aaKnown RBP17.19■□□□□ 0.34
SEC13-210ENST00000428626 URODP06132 367 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 RPA1P27694 616 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 GLUD2P49448 558 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 DSG1Q02413 1049 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 SAFBQ15424 915 aaKnown RBP eCLIP17.19■□□□□ 0.34
SEC13-210ENST00000428626 TTC38Q5R3I4 469 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 PADI6Q6TGC4 694 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 SUGP1Q8IWZ8 645 aaKnown RBP17.19■□□□□ 0.34
SEC13-210ENST00000428626 ZDHHC14Q8IZN3 488 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 TDRD5Q8NAT2 981 aaKnown RBP17.19■□□□□ 0.34
SEC13-210ENST00000428626 NACC1Q96RE7 527 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 TRIM6Q9C030 488 aaPredicted RBP17.19■□□□□ 0.34
SEC13-210ENST00000428626 CCDC113Q9H0I3 377 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 PDZD7Q9H5P4 517 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 RXFP1Q9HBX9 757 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 MAN1C1Q9NR34 630 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 PARP2Q9UGN5 583 aa17.19■□□□□ 0.34
SEC13-210ENST00000428626 PTGESO14684 152 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 SPATA31D3P0C874 917 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 CYP11B2P19099 503 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 AVPR2P30518 371 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 TOB1P50616 345 aaPredicted RBP17.18■□□□□ 0.34
SEC13-210ENST00000428626 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
SEC13-210ENST00000428626 MTMR3Q13615 1198 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 FAM187BQ17R55 369 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 C8orf34Q49A92 452 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 EEF1DP3Q658K8 133 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 FUT10Q6P4F1 479 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 SPATA31D4Q6ZUB0 917 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 NOSTRINQ8IVI9 506 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 STK39Q9UEW8 545 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 USTQ9Y2C2 406 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 DOCK6Q96HP0 2047 aa17.18■□□□□ 0.34
SEC13-210ENST00000428626 DOCK8Q8NF50 2099 aa17.17■□□□□ 0.34
SEC13-210ENST00000428626 RFPL2O75678 378 aa17.17■□□□□ 0.34
SEC13-210ENST00000428626 RPL17P18621 184 aaKnown RBP17.17■□□□□ 0.34
SEC13-210ENST00000428626 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
SEC13-210ENST00000428626 GRIK3Q13003 919 aa17.17■□□□□ 0.34
SEC13-210ENST00000428626 NAB2Q15742 525 aa17.17■□□□□ 0.34
SEC13-210ENST00000428626 USP34Q70CQ2 3546 aa17.17■□□□□ 0.34
SEC13-210ENST00000428626 PRIMPOLQ96LW4 560 aa17.17■□□□□ 0.34
SEC13-210ENST00000428626 PRMT7Q9NVM4 692 aaPredicted RBP17.17■□□□□ 0.34
SEC13-210ENST00000428626 SNTG2Q9NY99 539 aa17.17■□□□□ 0.34
SEC13-210ENST00000428626 MTCL1Q9Y4B5 1905 aaKnown RBP17.17■□□□□ 0.34
SEC13-210ENST00000428626 ARHGEF35A5YM69 484 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 ORC2Q13416 577 aaPredicted RBP17.16■□□□□ 0.34
SEC13-210ENST00000428626 C15orf39Q6ZRI6 1047 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 CCDC149Q6ZUS6 474 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 GLYCTKQ8IVS8 523 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 UBALD2Q8IYN6 164 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 CMASQ8NFW8 434 aaPredicted RBP17.16■□□□□ 0.34
SEC13-210ENST00000428626 HASPINQ8TF76 798 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 ZNF707Q96C28 371 aaPredicted RBP17.16■□□□□ 0.34
SEC13-210ENST00000428626 COLEC11Q9BWP8 271 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 PCDHB6Q9Y5E3 794 aa17.16■□□□□ 0.34
SEC13-210ENST00000428626 ZMYM2Q9UBW7 1377 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 TRIP11Q15643 1979 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 CASTOR2A6NHX0 329 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 RECQL4O94761 1208 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 GLUD1P00367 558 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 PRKCBP05771 671 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 ADH1AP07327 375 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 LIG1P18858 919 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.345e-11■■□□□ 11.9
SEC13-210ENST00000428626 RBM25P49756 843 aaKnown RBP17.15■□□□□ 0.34
SEC13-210ENST00000428626 FXR2P51116 673 aaKnown RBP eCLIP17.15■□□□□ 0.34
SEC13-210ENST00000428626 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
SEC13-210ENST00000428626 IL17AQ16552 155 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 RTP2Q5QGT7 225 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 LILRA6Q6PI73 481 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms