RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 MTCL1Q9Y4B5 1905 aaKnown RBP18.41■□□□□ 0.54
VARS-216ENST00000428445 PROB1E7EW31 1015 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 NPTXRO95502 500 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 XBP1P17861 261 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 KRT2P35908 639 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 TXKP42681 527 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 NUBP1P53384 320 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 C15orf39Q6ZRI6 1047 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 SLFN12Q8IYM2 578 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 CNNM3Q8NE01 707 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 PAAF1Q9BRP4 392 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 CXCL16Q9H2A7 254 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 RXFP1Q9HBX9 757 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 UBN1Q9NPG3 1134 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 GPRC5CQ9NQ84 441 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 PCDHA12Q9UN75 941 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 DUSP12Q9UNI6 340 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 USP20Q9Y2K6 914 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 DOCK8Q8NF50 2099 aa18.4■□□□□ 0.54
VARS-216ENST00000428445 PRR23AA6NEV1 266 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 TTLL13PA6NNM8 815 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 BTBD18B2RXH4 712 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 GAS2O43903 313 aaKnown RBP18.39■□□□□ 0.53
VARS-216ENST00000428445 GLUD1P00367 558 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 ADH1AP07327 375 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 AXLP30530 894 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 NBL1P41271 181 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 DSG1Q02413 1049 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 MXD4Q14582 209 aaPredicted RBP18.39■□□□□ 0.53
VARS-216ENST00000428445 SMG7Q92540 1137 aaKnown RBP18.39■□□□□ 0.53
VARS-216ENST00000428445 ZNF707Q96C28 371 aaPredicted RBP18.39■□□□□ 0.53
VARS-216ENST00000428445 TRIM6Q9C030 488 aaPredicted RBP18.39■□□□□ 0.53
VARS-216ENST00000428445 TTC12Q9H892 705 aaPredicted RBP18.39■□□□□ 0.53
VARS-216ENST00000428445 WDR6Q9NNW5 1121 aaKnown RBP18.39■□□□□ 0.53
VARS-216ENST00000428445 CHST7Q9NS84 486 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 PARP2Q9UGN5 583 aa18.39■□□□□ 0.53
VARS-216ENST00000428445 KRBA1A5PL33 1030 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 STK25O00506 426 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 TGM5O43548 720 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 AOC1P19801 751 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 RARRES1P49788 294 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 TFDP1Q14186 410 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 CALCRLQ16602 461 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 ME3Q16798 604 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 FUT10Q6P4F1 479 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 PRSS55Q6UWB4 352 aaPredicted RBP18.38■□□□□ 0.53
VARS-216ENST00000428445 IFNLR1Q8IU57 520 aaPredicted RBP18.38■□□□□ 0.53
VARS-216ENST00000428445 CMASQ8NFW8 434 aaPredicted RBP18.38■□□□□ 0.53
VARS-216ENST00000428445 HASPINQ8TF76 798 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 RIN2Q8WYP3 895 aaPredicted RBP18.38■□□□□ 0.53
VARS-216ENST00000428445 SNX27Q96L92 541 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 NAP1L4Q99733 375 aaKnown RBP18.38■□□□□ 0.53
VARS-216ENST00000428445 COLEC11Q9BWP8 271 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 POLR3FQ9H1D9 316 aaPredicted RBP18.38■□□□□ 0.53
VARS-216ENST00000428445 CA14Q9ULX7 337 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 GIT1Q9Y2X7 761 aa18.38■□□□□ 0.53
VARS-216ENST00000428445 RIF1Q5UIP0 2472 aaKnown RBP18.37■□□□□ 0.53
VARS-216ENST00000428445 POTEMA6NI47 508 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 JAK2O60674 1132 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 USO1O60763 962 aaKnown RBP18.37■□□□□ 0.53
VARS-216ENST00000428445 ATP2B1P20020 1258 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 NCBP1Q09161 790 aaKnown RBP18.37■□□□□ 0.53
VARS-216ENST00000428445 SLC44A3Q8N4M1 653 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 PIDD1Q9HB75 910 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 POLD4Q9HCU8 107 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 ANKEF1Q9NU02 776 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 STK39Q9UEW8 545 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 SSX2IPQ9Y2D8 614 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 CLUHO75153 1309 aa18.37■□□□□ 0.53
VARS-216ENST00000428445 DGAT1O75907 488 aa18.36■□□□□ 0.53
VARS-216ENST00000428445 LYPLA2O95372 231 aa18.36■□□□□ 0.53
VARS-216ENST00000428445 IGFBP6P24592 240 aaPredicted RBP18.36■□□□□ 0.53
VARS-216ENST00000428445 LILRA6Q6PI73 481 aa18.36■□□□□ 0.53
VARS-216ENST00000428445 GET4Q7L5D6 327 aaPredicted RBP18.36■□□□□ 0.53
VARS-216ENST00000428445 DTWD2Q8NBA8 298 aa18.36■□□□□ 0.53
VARS-216ENST00000428445 CCDC51Q96ER9 411 aa18.36■□□□□ 0.53
VARS-216ENST00000428445 MTMR9Q96QG7 549 aa18.36■□□□□ 0.53
VARS-216ENST00000428445 IGSF9Q9P2J2 1179 aa18.36■□□□□ 0.53
VARS-216ENST00000428445 ADAM28Q9UKQ2 775 aa18.36■□□□□ 0.53
VARS-216ENST00000428445 A0A1B0GUA9 196 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 CASTOR2A6NHX0 329 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 LRRIQ4A6NIV6 560 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 NR1I2O75469 434 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 TADA2AO75478 443 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 SPATA31C1P0DKV0 1188 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 NTHL1P78549 312 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 POU5F1BQ06416 359 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 ANGPT1Q15389 498 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 USP41Q3LFD5 358 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 RTP2Q5QGT7 225 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 SLC27A1Q6PCB7 646 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 CCDC105Q8IYK2 499 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 CCDC43Q96MW1 224 aaKnown RBP18.35■□□□□ 0.53
VARS-216ENST00000428445 RPP25Q9BUL9 199 aaKnown RBP18.35■□□□□ 0.53
VARS-216ENST00000428445 SPTBN4Q9H254 2564 aa18.35■□□□□ 0.53
VARS-216ENST00000428445 FAM186AA6NE01 2351 aa18.34■□□□□ 0.53
VARS-216ENST00000428445 NEMFO60524 1076 aa18.34■□□□□ 0.53
VARS-216ENST00000428445 MED24O75448 989 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms