RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 FAM187BQ17R55 369 aa19.31■□□□□ 0.68
DDR1-235ENST00000428153 PLEKHA4Q9H4M7 779 aa19.31■□□□□ 0.68
DDR1-235ENST00000428153 PRMT7Q9NVM4 692 aaPredicted RBP19.31■□□□□ 0.68
DDR1-235ENST00000428153 TEX28O15482 410 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 GALR2O43603 387 aaPredicted RBP19.3■□□□□ 0.68
DDR1-235ENST00000428153 PDGFBP01127 241 aaPredicted RBP19.3■□□□□ 0.68
DDR1-235ENST00000428153 SSBP05455 408 aaKnown RBP eCLIP19.3■□□□□ 0.68
DDR1-235ENST00000428153 ASGR2P07307 311 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 MUTP22033 750 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 CLCN5P51795 746 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 CREMQ03060 361 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 SAFBQ15424 915 aaKnown RBP eCLIP19.3■□□□□ 0.68
DDR1-235ENST00000428153 CDCA2Q69YH5 1023 aaPredicted RBP19.3■□□□□ 0.68
DDR1-235ENST00000428153 KANK3Q6NY19 840 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 GSTCDQ8NEC7 633 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 PIGOQ8TEQ8 1089 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 STAMQ92783 540 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 ZFP42Q96MM3 310 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 NACC1Q96RE7 527 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 POLR3FQ9H1D9 316 aaPredicted RBP19.3■□□□□ 0.68
DDR1-235ENST00000428153 NXF3Q9H4D5 531 aaKnown RBP19.3■□□□□ 0.68
DDR1-235ENST00000428153 MAN1C1Q9NR34 630 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 MIOSQ9NXC5 875 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 FNIP2Q9P278 1114 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 IGSF9Q9P2J2 1179 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 HES2Q9Y543 173 aa19.3■□□□□ 0.68
DDR1-235ENST00000428153 DMDP11532 3685 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 SPATA31C1P0DKV0 1188 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 NEK4P51957 841 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 TDGQ13569 410 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 USP41Q3LFD5 358 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 POLR3CQ9BUI4 534 aaPredicted RBP19.29■□□□□ 0.68
DDR1-235ENST00000428153 C2orf40Q9H1Z8 148 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 FZD8Q9H461 694 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 WDR6Q9NNW5 1121 aaKnown RBP19.29■□□□□ 0.68
DDR1-235ENST00000428153 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 C2orf16Q68DN1 1984 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 CFAP54Q96N23 3096 aa19.29■□□□□ 0.68
DDR1-235ENST00000428153 POTEMA6NI47 508 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 WNT7AO00755 349 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 C2CD2LO14523 706 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 ST18O60284 1047 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 JAK2O60674 1132 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 USO1O60763 962 aaKnown RBP19.28■□□□□ 0.68
DDR1-235ENST00000428153 DTNBO60941 627 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 ASTLQ6HA08 431 aaPredicted RBP19.28■□□□□ 0.68
DDR1-235ENST00000428153 FUT10Q6P4F1 479 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 TAS1R1Q7RTX1 841 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 CATSPER3Q86XQ3 398 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 ZBTB8OSQ8IWT0 167 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 NXPE3Q969Y0 559 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 PHOX2BQ99453 314 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 TMEM60Q9H2L4 133 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 ZDHHC7Q9NXF8 308 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 ADAM28Q9UKQ2 775 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 DUSP12Q9UNI6 340 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 VPS13AQ96RL7 3174 aa19.28■□□□□ 0.68
DDR1-235ENST00000428153 CCDC195A0A1B0GUA6 201 aa19.27■□□□□ 0.68
DDR1-235ENST00000428153 LRRIQ4A6NIV6 560 aa19.27■□□□□ 0.68
DDR1-235ENST00000428153 PROB1E7EW31 1015 aa19.27■□□□□ 0.68
DDR1-235ENST00000428153 B4GALT5O43286 388 aa19.27■□□□□ 0.68
DDR1-235ENST00000428153 RPA1P27694 616 aa19.27■□□□□ 0.68
DDR1-235ENST00000428153 ERMNQ8TAM6 284 aa19.27■□□□□ 0.68
DDR1-235ENST00000428153 FOXP1Q9H334 677 aaPredicted RBP19.27■□□□□ 0.68
DDR1-235ENST00000428153 KCNK12Q9HB15 430 aa19.27■□□□□ 0.68
DDR1-235ENST00000428153 MTCL1Q9Y4B5 1905 aaKnown RBP19.27■□□□□ 0.67
DDR1-235ENST00000428153 SF3B1O75533 1304 aaKnown RBP eCLIP19.26■□□□□ 0.676e-6■■■■■ 122.4
DDR1-235ENST00000428153 N4BP3O15049 544 aa19.26■□□□□ 0.67
DDR1-235ENST00000428153 NPTXRO95502 500 aa19.26■□□□□ 0.67
DDR1-235ENST00000428153 ATP2B1P20020 1258 aa19.26■□□□□ 0.67
DDR1-235ENST00000428153 AKAP5P24588 427 aa19.26■□□□□ 0.67
DDR1-235ENST00000428153 MCM7P33993 719 aa19.26■□□□□ 0.67
DDR1-235ENST00000428153 ATOH1Q92858 354 aaPredicted RBP19.26■□□□□ 0.67
DDR1-235ENST00000428153 LLPHQ9BRT6 129 aaKnown RBP19.26■□□□□ 0.67
DDR1-235ENST00000428153 APOL6Q9BWW8 343 aa19.26■□□□□ 0.67
DDR1-235ENST00000428153 MFSD1Q9H3U5 465 aa19.26■□□□□ 0.67
DDR1-235ENST00000428153 EPS15L1Q9UBC2 864 aa19.26■□□□□ 0.67
DDR1-235ENST00000428153 RIF1Q5UIP0 2472 aaKnown RBP19.26■□□□□ 0.67
DDR1-235ENST00000428153 CLUHO75153 1309 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 PLXNA3P51805 1871 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 MED24O75448 989 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 OR52Z1P0C646 297 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 CYP11B2P19099 503 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 NAMPTP43490 491 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 TRAPPC10P48553 1259 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 TUSC3Q13454 348 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 PPP2R5AQ15172 486 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 MAPK6Q16659 721 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 HAUS3Q68CZ6 603 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 LILRA6Q6PI73 481 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 TMEM105Q8N8V8 129 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 GPR62Q9BZJ7 368 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 SMOC2Q9H3U7 446 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 GPRC5CQ9NQ84 441 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 PARP2Q9UGN5 583 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 LIMCH1Q9UPQ0 1083 aa19.25■□□□□ 0.67
DDR1-235ENST00000428153 ACKR2O00590 384 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 TADA2AO75478 443 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 ST3GAL1Q11201 340 aa19.24■□□□□ 0.67
DDR1-235ENST00000428153 HSP90AA2PQ14568 343 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms