RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 SGO1Q5FBB7 561 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 RUNDC3BQ96NL0 473 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 CYP4F11Q9HBI6 524 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 MYO3BQ8WXR4 1341 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 DIAPH2O60879 1101 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 SUN1O94901 812 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 LRRC74AQ0VAA2 488 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 HEATR6Q6AI08 1181 aaKnown RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 PRR23CQ6ZRP0 262 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 MB21D2Q8IYB1 491 aaPredicted RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 FAM136AQ96C01 138 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 CLMNQ96JQ2 1002 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 FAM167AQ96KS9 214 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 PI4K2AQ9BTU6 479 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 ZNF70Q9UC06 446 aaPredicted RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 STRIP2Q9ULQ0 834 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 ZNRF3Q9ULT6 936 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 ADGRA2Q96PE1 1338 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 A0A1B0GUA9 196 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 H0Y3Z8 333 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 CDH6P55285 790 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 ABI2Q9NYB9 513 aaPredicted RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 KIF17Q9P2E2 1029 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 GGT7Q9UJ14 662 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 TMEM247A6NEH6 219 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 P4HBP07237 508 aaKnown RBP13.96□□□□□ -0.17
SPG11-202ENST00000427534 EPC2Q52LR7 807 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 EFHC2Q5JST6 749 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 PGBD4Q96DM1 585 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 AIPL1Q9NZN9 384 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 KIF28PB7ZC32 967 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 RASGRF2O14827 1237 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 NPTXRO95502 500 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 PAPOLAP51003 745 aaKnown RBP13.96□□□□□ -0.17
SPG11-202ENST00000427534 ST8SIA6P61647 398 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 UBE3AQ05086 875 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 PID1Q7Z2X4 250 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 CCDC197Q8NCU1 140 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 DHX38Q92620 1227 aaKnown RBP13.96□□□□□ -0.17
SPG11-202ENST00000427534 ELMO3Q96BJ8 720 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 VMP1Q96GC9 406 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 COPEO14579 308 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 HOXA7P31268 230 aaPredicted RBP13.96□□□□□ -0.17
SPG11-202ENST00000427534 TWF1Q12792 350 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 ATG16L1Q676U5 607 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 FMO2Q99518 471 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 TRPV6Q9H1D0 765 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 PLEKHA5Q9HAU0 1116 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 MYOZ2Q9NPC6 264 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 CPSF2Q9P2I0 782 aaKnown RBP13.96□□□□□ -0.17
SPG11-202ENST00000427534 PPARGC1AQ9UBK2 798 aaKnown RBP13.96□□□□□ -0.17
SPG11-202ENST00000427534 FAF1Q9UNN5 650 aaPredicted RBP13.96□□□□□ -0.17
SPG11-202ENST00000427534 STK36Q9NRP7 1315 aa13.96□□□□□ -0.17
SPG11-202ENST00000427534 HSPA6P17066 643 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 APPL2Q8NEU8 664 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 PANX2Q96RD6 677 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 NEUROG2Q9H2A3 272 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 EPC1Q9H2F5 836 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 CPA4Q9UI42 421 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 L3MBTL1Q9Y468 752 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 DAB2P98082 770 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 CDC42EP5Q6NZY7 148 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 NFRKBQ6P4R8 1299 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 ABHD8Q96I13 439 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 CCDC90BQ9GZT6 254 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 PLAAQ9Y263 795 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 SH3BP1Q9Y3L3 701 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 WDR19Q8NEZ3 1342 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 RFX7Q2KHR2 1363 aa13.96□□□□□ -0.18
SPG11-202ENST00000427534 CSDE1O75534 798 aaKnown RBP13.95□□□□□ -0.18
SPG11-202ENST00000427534 SMTNL2Q2TAL5 461 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 GPD1LQ8N335 351 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 BTN2A2Q8WVV5 523 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 DCUN1D1Q96GG9 259 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 CPB2Q96IY4 423 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 CYBBP04839 570 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ZBED8Q8IZ13 594 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ZNF280CQ8ND82 737 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 TBC1D22BQ9NU19 505 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 GLI2P10070 1586 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ALKQ9UM73 1620 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ATMINO43313 823 aaPredicted RBP13.95□□□□□ -0.18
SPG11-202ENST00000427534 MAP3K6O95382 1288 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 WEE2P0C1S8 567 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 CHRNA3P32297 505 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ANKRD20A4Q4UJ75 823 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ZC2HC1CQ53FD0 456 aaPredicted RBP13.95□□□□□ -0.18
SPG11-202ENST00000427534 ANKRD20A8PQ5CZ79 823 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ZC3H12BQ5HYM0 836 aaKnown RBP13.95□□□□□ -0.18
SPG11-202ENST00000427534 ANKRD20A2Q5SQ80 823 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ANKRD20A1Q5TYW2 823 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 RASIP1Q5U651 963 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 PDIK1LQ8N165 341 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 TMEM35BQ8NCS4 154 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ZBTB18Q99592 522 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 ELAC2Q9BQ52 826 aaKnown RBP13.95□□□□□ -0.18
SPG11-202ENST00000427534 ISCA1Q9BUE6 129 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 KCNN4O15554 427 aa13.95□□□□□ -0.18
SPG11-202ENST00000427534 EFCAB12Q6NXP0 572 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms