RNA–Protein interactions for RNA: ENST00000427412.5

CITED1-204, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

TSL 2

Gene CITED1, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-204ENST00000427412 SF3A1Q15459 793 aaKnown RBP16.54■□□□□ 0.24
CITED1-204ENST00000427412 UBXN11Q5T124 520 aa16.54■□□□□ 0.24
CITED1-204ENST00000427412 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
CITED1-204ENST00000427412 TPH2Q8IWU9 490 aa16.54■□□□□ 0.24
CITED1-204ENST00000427412 RNF168Q8IYW5 571 aaPredicted RBP16.54■□□□□ 0.24
CITED1-204ENST00000427412 SLC7A3Q8WY07 619 aa16.54■□□□□ 0.24
CITED1-204ENST00000427412 HERC2P3Q9BVR0 1158 aa16.54■□□□□ 0.24
CITED1-204ENST00000427412 BMP2KQ9NSY1 1161 aaPredicted RBP16.54■□□□□ 0.24
CITED1-204ENST00000427412 DAXXQ9UER7 740 aaPredicted RBP16.54■□□□□ 0.24
CITED1-204ENST00000427412 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 INPPL1O15357 1258 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 GAS2O43903 313 aaKnown RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 PAPLNO95428 1278 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 SOD2P04179 222 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 AFF1P51825 1210 aaKnown RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 ATP2C1P98194 919 aaPredicted RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 CCDC105Q8IYK2 499 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 C4orf32Q8N8J7 132 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 NKD2Q969F2 451 aaPredicted RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 CCDC43Q96MW1 224 aaKnown RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 ZSCAN16Q9H4T2 348 aaPredicted RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 MINDY3Q9H8M7 445 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 KCNK12Q9HB15 430 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 MRPL17Q9NRX2 175 aaKnown RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 MARCH5Q9NX47 278 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 IGSF9Q9P2J2 1179 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 KANSL3Q9P2N6 904 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 WRAP73Q9P2S5 460 aaPredicted RBP16.53■□□□□ 0.24
CITED1-204ENST00000427412 CLIC4Q9Y696 253 aa16.53■□□□□ 0.24
CITED1-204ENST00000427412 PATJQ8NI35 1801 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 VWA3AA6NCI4 1184 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 PP2D1A8MPX8 630 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 NRP1O14786 923 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 DKC1O60832 514 aaKnown RBP eCLIP16.52■□□□□ 0.24
CITED1-204ENST00000427412 F13A1P00488 732 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 NCLP19338 710 aaKnown RBP16.52■□□□□ 0.24
CITED1-204ENST00000427412 KLRC2P26717 231 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 ANP32AP39687 249 aaKnown RBP16.52■□□□□ 0.24
CITED1-204ENST00000427412 NPEPPSP55786 919 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 ZRSR1Q15695 479 aaKnown RBP16.52■□□□□ 0.24
CITED1-204ENST00000427412 CYP26C1Q6V0L0 522 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 DTHD1Q6ZMT9 781 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 FRMD5Q7Z6J6 570 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 EXOC8Q8IYI6 725 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 ERMNQ8TAM6 284 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 PSPC1Q8WXF1 523 aaKnown RBP16.52■□□□□ 0.24
CITED1-204ENST00000427412 RAB34Q9BZG1 259 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 FAN1Q9Y2M0 1017 aa16.52■□□□□ 0.24
CITED1-204ENST00000427412 VWA8A3KMH1 1905 aa16.52■□□□□ 0.23
CITED1-204ENST00000427412 WDR87Q6ZQQ6 2873 aa16.52■□□□□ 0.23
CITED1-204ENST00000427412 EP300Q09472 2414 aaPredicted RBP16.51■□□□□ 0.23
CITED1-204ENST00000427412 A0A087WWV3 80 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 LAD1O00515 517 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 N4BP1O75113 896 aaKnown RBP16.51■□□□□ 0.23
CITED1-204ENST00000427412 SSBP05455 408 aaKnown RBP eCLIP16.51■□□□□ 0.23
CITED1-204ENST00000427412 URODP06132 367 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 RFC5P40937 340 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 FXR2P51116 673 aaKnown RBP eCLIP16.51■□□□□ 0.23
CITED1-204ENST00000427412 DSC1Q08554 894 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 PCBP1Q15365 356 aaKnown RBP eCLIP16.51■□□□□ 0.23
CITED1-204ENST00000427412 HAUS3Q68CZ6 603 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 POTEGQ6S5H5 508 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
CITED1-204ENST00000427412 CNNM3Q8NE01 707 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 FLCNQ8NFG4 579 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 SNX29Q8TEQ0 813 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 FAM193BQ96PV7 902 aaPredicted RBP16.51■□□□□ 0.23
CITED1-204ENST00000427412 USP28Q96RU2 1077 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 RPS6KC1Q96S38 1066 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 RTP3Q9BQQ7 232 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 ZSWIM4Q9H7M6 989 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 LRWD1Q9UFC0 647 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
CITED1-204ENST00000427412 CLUHO75153 1309 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 OTOGLQ3ZCN5 2332 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 PI15O43692 258 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 MED24O75448 989 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 POMCP01189 267 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 ALDH2P05091 517 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 ADH1AP07327 375 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 MARCKSP29966 332 aaPredicted RBP16.5■□□□□ 0.23
CITED1-204ENST00000427412 CDC25AP30304 524 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 CCT6AP40227 531 aaKnown RBP16.5■□□□□ 0.23
CITED1-204ENST00000427412 LAMTOR4Q0VGL1 99 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 IL17AQ16552 155 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 C4orf19Q8IY42 314 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 COLGALT2Q8IYK4 626 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 SMG8Q8ND04 991 aaKnown RBP16.5■□□□□ 0.23
CITED1-204ENST00000427412 PRPF31Q8WWY3 499 aaKnown RBP16.5■□□□□ 0.23
CITED1-204ENST00000427412 CEP170P1Q96L14 293 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 RXFP1Q9HBX9 757 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 WDR6Q9NNW5 1121 aaKnown RBP16.5■□□□□ 0.23
CITED1-204ENST00000427412 UBN1Q9NPG3 1134 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 EPS15L1Q9UBC2 864 aa16.5■□□□□ 0.23
CITED1-204ENST00000427412 DPP7Q9UHL4 492 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms