RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ATP6V0A4Q9HBG4 840 aa12.47□□□□□ -0.41
UBR4-207ENST00000425413 INTUQ9ULD6 942 aa12.47□□□□□ -0.41
UBR4-207ENST00000425413 ADM5C9JUS6 153 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 ZBTB48P10074 688 aaPredicted RBP12.46□□□□□ -0.41
UBR4-207ENST00000425413 TNNI1P19237 187 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 MARK3P27448 753 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 FLT3P36888 993 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 ATP1A2P50993 1020 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 PPATQ06203 517 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 BIRC3Q13489 604 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 ZBTB41Q5SVQ8 909 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 WDR78Q5VTH9 848 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 LLGL2Q6P1M3 1020 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 C12orf56Q8IXR9 622 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 FBXL13Q8NEE6 735 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 GLG1Q92896 1179 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 NT5C1BQ96P26 610 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 RAB20Q9NX57 234 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 HOXC10Q9NYD6 342 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 TMEM59LQ9UK28 342 aa12.46□□□□□ -0.41
UBR4-207ENST00000425413 C19orf81C9J6K1 198 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 NCANO14594 1321 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 DDX3YO15523 660 aaKnown RBP12.46□□□□□ -0.42
UBR4-207ENST00000425413 MFAP3P55082 362 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 CYP24A1Q07973 514 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 EMC2Q15006 297 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 MIS18BP1Q6P0N0 1132 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 ABHD15Q6UXT9 468 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 ERVK-5Q9HDB9 667 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 GINM1Q9NU53 330 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 AFG3L2Q9Y4W6 797 aa12.46□□□□□ -0.42
UBR4-207ENST00000425413 DGAT1O75907 488 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 FDX1P10109 184 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 ATP4AP20648 1035 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 NLRP11P59045 1033 aaKnown RBP12.45□□□□□ -0.42
UBR4-207ENST00000425413 STXBP2Q15833 593 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 TTMPQ5BVD1 217 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 SCARA3Q6AZY7 606 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 ASAP3Q8TDY4 903 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 ZNF653Q96CK0 615 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 ST6GALNAC4Q9H4F1 302 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
UBR4-207ENST00000425413 CWC15Q9P013 229 aaKnown RBP12.45□□□□□ -0.42
UBR4-207ENST00000425413 BTBD7Q9P203 1132 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 NOCTQ9UK39 431 aaKnown RBP12.45□□□□□ -0.42
UBR4-207ENST00000425413 ANKRD65E5RJM6 399 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 USP2O75604 605 aaPredicted RBP12.45□□□□□ -0.42
UBR4-207ENST00000425413 SUPT20HL2P0C7V6 817 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 CYP11B1P15538 503 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 COMTP21964 271 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 GPC5P78333 572 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 IRX5P78411 483 aaPredicted RBP12.45□□□□□ -0.42
UBR4-207ENST00000425413 FMO1Q01740 532 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 SUPT20HL1Q3ZLR7 823 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 FAM71AQ8IYT1 594 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 GPD1LQ8N335 351 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 HELQQ8TDG4 1101 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 OTUD5Q96G74 571 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 TARS2Q9BW92 718 aaKnown RBP12.45□□□□□ -0.42
UBR4-207ENST00000425413 TMEM8AQ9HCN3 771 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 ZNF302Q9NR11 478 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 DOCK5Q9H7D0 1870 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 ZNF233A6NK53 670 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 SPOPO43791 374 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 PGK2P07205 417 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 DRP2Q13474 957 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 MCPH1Q8NEM0 835 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 ZNF516Q92618 1163 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 CAVIN3Q969G5 261 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 FAM212AQ96EL1 285 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 FNBP1Q96RU3 617 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 TIPINQ9BVW5 301 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 NUP85Q9BW27 656 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 TRIM7Q9C029 511 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 PSD3Q9NYI0 1048 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 ADAMTS5Q9UNA0 930 aa12.45□□□□□ -0.42
UBR4-207ENST00000425413 P4HA2O15460 535 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 PDE6CP51160 858 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 PDE4CQ08493 712 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 XKR3Q5GH77 459 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 DAB2IPQ5VWQ8 1189 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 XRRA1Q6P2D8 792 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 PASD1Q8IV76 773 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 CPA5Q8WXQ8 436 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 SHC3Q92529 594 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 CLMNQ96JQ2 1002 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 ELP3Q9H9T3 547 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 LCMT1Q9UIC8 334 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 PLAAQ9Y263 795 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 PTPRJQ12913 1337 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 RTN2O75298 545 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 RFX1P22670 979 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 STRN3Q13033 797 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.44□□□□□ -0.42
UBR4-207ENST00000425413 DEPTORQ8TB45 409 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 UBLCP1Q8WVY7 318 aaPredicted RBP12.44□□□□□ -0.42
UBR4-207ENST00000425413 SPIRE2Q8WWL2 714 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 ZBTB10Q96DT7 871 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms