RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 M0R2N6 131 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 EDIL3O43854 480 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SPATA31D3P0C874 917 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 FSHRP23945 695 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 GRIK3Q13003 919 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 CTTNQ14247 550 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PPM1LQ5SGD2 360 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 UBXN11Q5T124 520 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 FUT10Q6P4F1 479 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SPATA31D4Q6ZUB0 917 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 GET4Q7L5D6 327 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 CEP57Q86XR8 500 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 GPR161Q8N6U8 529 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 CPB2Q96IY4 423 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 NELL2Q99435 816 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PHF20Q9BVI0 1012 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 BCO2Q9BYV7 579 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MINDY3Q9H8M7 445 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 CHST7Q9NS84 486 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 POLIQ9UNA4 740 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 KCNJ14Q9UNX9 436 aa13.61□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TGM5O43548 720 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SLC37A4O43826 429 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TSPAN1O60635 241 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 KINO60870 393 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 RFPL2O75678 378 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ZMYND10O75800 440 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MYBP10242 640 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 CYP4A11Q02928 519 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 DSC1Q08554 894 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 RTL10Q7L3V2 364 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TAS1R1Q7RTX1 841 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 GLYCTKQ8IVS8 523 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 C1orf210Q8IVY1 113 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 GPR152Q8TDT2 470 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 RSAD2Q8WXG1 361 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 RUBCNQ92622 972 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PRIMPOLQ96LW4 560 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 EIF2AK1Q9BQI3 630 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 EIF2AQ9BY44 585 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 NFKBIZQ9BYH8 718 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 C2orf40Q9H1Z8 148 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SLC2A4RGQ9NR83 387 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PRMT7Q9NVM4 692 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 VAV3Q9UKW4 847 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
HLA-DQB3-203ENST00000425319 LRRIQ4A6NIV6 560 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 LAMTOR5O43504 91 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TRAPPC3O43617 180 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 NARSO43776 548 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SLITRK3O94933 977 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 NPTXRO95502 500 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 THP07101 528 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 KRT2P35908 639 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MAGEA9P43362 315 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PRKCQQ04759 706 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TOB2Q14106 344 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 HSP90AA2PQ14568 343 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PUM1Q14671 1186 aaKnown RBP eCLIP13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 CALCRLQ16602 461 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 UVSSAQ2YD98 709 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 DGLUCYQ7Z3D6 616 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MCPH1Q8NEM0 835 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ATRIPQ8WXE1 791 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MYADMQ96S97 322 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TTPALQ9BTX7 342 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MARCH5Q9NX47 278 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MRPS17Q9Y2R5 130 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 HES2Q9Y543 173 aa13.59□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.23
HLA-DQB3-203ENST00000425319 A0A1B0GUA9 196 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 N4BP3O15049 544 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 LYPLA2O95372 231 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ARF4P18085 180 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 AKAP5P24588 427 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ELF1P32519 619 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 AFF1P51825 1210 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 TUSC3Q13454 348 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 FAM171A1Q5VUB5 890 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 RSPO2Q6UXX9 243 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ERMNQ8TAM6 284 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 MIOSQ9NXC5 875 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 CDH7Q9ULB5 785 aa13.58□□□□□ -0.24
HLA-DQB3-203ENST00000425319 KRBA1A5PL33 1030 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ANHXE9PGG2 379 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 DCNP07585 359 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ATP2B1P20020 1258 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 HOXA9P31269 272 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ARL2P36404 184 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms